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L2_041_000G1_scaffold_1361

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1361_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..788)
DNA (786bp) protein (262aa)
PTS system, galactose-specific IIC component {ECO:0000313|EMBL:KJZ97358.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ97358.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A222_CLOBU
outer membrane protein
L2_041_000G1_scaffold_1361_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(923..4126)
DNA (3204bp) protein (1068aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI4_CLOBU
RND multidrug efflux transporter Acriflavin resistance protein {ECO:0000313|EMBL:KJZ87139.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative multidrug efflux pump, membrane protein
L2_041_000G1_scaffold_1361_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4131..5381)
DNA (1251bp) protein (417aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSF6_CLOBU
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ENZ30551.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RND family efflux transporter MFP subunit
L2_041_000G1_scaffold_1361_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5705..6190
DNA (486bp) protein (162aa)
MarR-family transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QZY9_CLOBU
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ87237.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
MarR-family transcriptional regulator
L2_041_000G1_scaffold_1361_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6249..7046)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACQ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87207.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
endonuclease/exonuclease/phosphatase family protein
L2_041_000G1_scaffold_1361_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7052..8707)
DNA (1656bp) protein (552aa)
pts system, iibc component (EC:2.7.1.69)
Pts system, iibc component n=2 Tax=Clostridium butyricum RepID=M8JES7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87189.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_041_000G1_scaffold_1361_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8834..10507)
DNA (1674bp) protein (558aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEH8_CLOBU
glycosyl hydrolase family protein
L2_041_000G1_scaffold_1361_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10773..11774)
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family n=4 Tax=Clostridium butyricum RepID=B1QZY5_CLOBU
Maltose operon transcriptional repressor MalR, LacI family {ECO:0000313|EMBL:KJZ87202.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
alanine racemase
L2_041_000G1_scaffold_1361_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12023..13615)
DNA (1593bp) protein (531aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
malQ1; 4-alpha-glucanotransferase MalQ (EC:2.4.1.25)
4-alpha-glucanotransferase n=3 Tax=Clostridium butyricum RepID=M8K9J8_CLOBU
L2_041_000G1_scaffold_1361_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13774..14676)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACP7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30544.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport systems inner membrane component
L2_041_000G1_scaffold_1361_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14676..15542)
DNA (867bp) protein (289aa)
ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JET1_CLOBU
Multiple sugar-binding transport system permease {ECO:0000313|EMBL:ETI91674.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC transporter permease
L2_041_000G1_scaffold_1361_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15638..16975)
DNA (1338bp) protein (446aa)
UPI0003D5D09A related cluster n=1 Tax=unknown RepID=UPI0003D5D09A
Maltose-binding protein {ECO:0000313|EMBL:ETI91675.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
extracellular solute-binding protein
L2_041_000G1_scaffold_1361_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17284..17544)
DNA (261bp) protein (87aa)
Excinuclease ABC, C subunit domain protein n=2 Tax=Clostridium butyricum RepID=M8J5W5_CLOBU
GIY-YIG domain protein {ECO:0000313|EMBL:KJZ87212.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative endonuclease containing a URI domain
L2_041_000G1_scaffold_1361_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17756..17998)
DNA (243bp) protein (81aa)
ilvB1; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSY2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87186.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_041_000G1_scaffold_1361_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17947..19155)
DNA (1209bp) protein (403aa)
Ketol-acid reductoisomerase {ECO:0000313|EMBL:KJZ97376.1}; EC=1.1.1.86 {ECO:0000313|EMBL:KJZ97376.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ilvB1; acetolactate synthase large subunit (EC:2.2.1.6)
UPI0003D677F5 related cluster n=1 Tax=unknown RepID=UPI0003D677F5
L2_041_000G1_scaffold_1361_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19323..20981)
DNA (1659bp) protein (553aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=4 Tax=Clostridium butyricum RepID=B1QZX8_CLOBU
L2_041_000G1_scaffold_1361_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20988..22085)
DNA (1098bp) protein (366aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
UPI0003D61BDA related cluster n=1 Tax=unknown RepID=UPI0003D61BDA
L2_041_000G1_scaffold_1361_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22262..22747)
DNA (486bp) protein (162aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
leuD; 3-isopropylmalate dehydratase small subunit LeuD (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=4 Tax=Clostridium butyricum RepID=B1QZX6_CLOBU
L2_041_000G1_scaffold_1361_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22761..24020)
DNA (1260bp) protein (420aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
leuC2; 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=2 Tax=Clostridium butyricum RepID=M8J5X1_CLOBU
L2_041_000G1_scaffold_1361_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24035..25630)
DNA (1596bp) protein (532aa)
AIPM/hcit synthase family transferase (EC:2.3.3.-)
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9L0_CLOBU
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:ETI91682.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_041_000G1_scaffold_1361_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25743..26249)
DNA (507bp) protein (169aa)
Acetolactate synthase small subunit {ECO:0000313|EMBL:KJZ87179.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KJZ87179.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ilvH; acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Clostridium butyricum RepID=M8K1H5_CLOBU
L2_041_000G1_scaffold_1361_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26763..27176)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JET9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87208.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_000G1_scaffold_1361_23
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27356..28702)
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Phosphoglucosamine mutase n=2 Tax=Clostridium butyricum RepID=M8JG57_CLOBU
glmM; phosphoglucosamine mutase
L2_041_000G1_scaffold_1361_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28952..29266)
DNA (315bp) protein (105aa)
Isoaspartyl dipeptidase {ECO:0000313|EMBL:KJZ97400.1}; EC=3.4.19.5 {ECO:0000313|EMBL:KJZ97400.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
TrpR homolog, YerC/YecD family n=3 Tax=Clostridium butyricum RepID=C4IEZ0_CLOBU
TrpR like protein, YerC/YecD
L2_041_000G1_scaffold_1361_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29359..31665)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACN2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30529.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HTH DNA-binding protein
L2_041_000G1_scaffold_1361_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31689..32072)
DNA (384bp) protein (128aa)
Peptidase M56, BlaR1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1H9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30529.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidase M56, BlaR1
L2_041_000G1_scaffold_1361_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32106..34091)
DNA (1986bp) protein (662aa)
Peptidase M56, BlaR1 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEU4_CLOBU
Peptidase M56, BlaR1 {ECO:0000313|EMBL:ETI91689.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
peptidase M56, BlaR1
L2_041_000G1_scaffold_1361_28
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34120..34512)
DNA (393bp) protein (131aa)
Penicillinase repressor n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5Y0_CLOBU
Beta-lactamase repressor BlaI {ECO:0000313|EMBL:KJZ94283.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
penicillinase repressor
L2_041_000G1_scaffold_1361_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34722..34904)
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QZW5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30526.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 29 items

View Taxonomy