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L2_041_000G1_scaffold_1409

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1409_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1321
DNA (1320bp) protein (440aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Escherichia coli TA280 RepID=F4UZY0_ECOLX
L2_041_000G1_scaffold_1409_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1432..2562)
DNA (1131bp) protein (377aa)
Peyer's patch-specific virulence factor GipA n=196 Tax=Escherichia coli RepID=E2QIE0_ECOLX
GipA; Peyer's patch-specific virulence factor GipA
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EHU14533.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
L2_041_000G1_scaffold_1409_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2671..3147
DNA (477bp) protein (159aa)
UPF0098 protein ybhB n=307 Tax=Escherichia RepID=E2QID9_ECOLX
ybhB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ22963.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
L2_041_000G1_scaffold_1409_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3445..4377
DNA (933bp) protein (311aa)
Pectinesterase n=1 Tax=Escherichia coli HVH 198 (4-3206106) RepID=T7UTZ8_ECOLX
ybhC; pectinesterase
Pectinesterase {ECO:0000313|EMBL:EOX01099.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_041_000G1_scaffold_1409_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4517..6778)
DNA (2262bp) protein (754aa)
Aconitate hydratase n=25 Tax=Escherichia coli RepID=F4SWX4_ECOLX
Aconitate hydratase {ECO:0000313|EMBL:EGI16795.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
ybhJ; hypothetical protein
L2_041_000G1_scaffold_1409_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6961..8331)
DNA (1371bp) protein (457aa)
Inner membrane protein ybhI n=337 Tax=Escherichia RepID=E2QID6_ECOLX
putative anion transporter
Inner membrane protein ybhI {ECO:0000313|EMBL:EZJ45086.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_041_000G1_scaffold_1409_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8367..9332)
DNA (966bp) protein (322aa)
Uncharacterized protein n=96 Tax=Escherichia coli RepID=B7NA12_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE31896.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L2_041_000G1_scaffold_1409_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9516..10469
DNA (954bp) protein (318aa)
Predicted DNA-binding transcriptional regulator n=6 Tax=Escherichia RepID=A1A910_ECOK1
LysR family transcriptional regulator
LysR family transcriptional regulator YbhD {ECO:0000313|EMBL:EFE63270.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_041_000G1_scaffold_1409_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10510..11190)
DNA (681bp) protein (227aa)
6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000256|HAMAP-Rule:MF_01605, ECO:0000256|SAAS:SAAS00017521}; Short=6-P-gluconolactonase {ECO:0000256|HAMAP-Rule:MF_01605};; EC=3.1.1.31 {ECO:0000256|HAMAP-Rule:MF_01605, ECO:0000256|SAAS:SAAS00017517};; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
6-phosphogluconolactonase n=1 Tax=Escherichia coli KTE54 RepID=L4CJV6_ECOLX
L2_041_000G1_scaffold_1409_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11187..11294)
DNA (108bp) protein (36aa)
6-phosphogluconolactonase {ECO:0000256|HAMAP-Rule:MF_01605, ECO:0000256|SAAS:SAAS00017521}; Short=6-P-gluconolactonase {ECO:0000256|HAMAP-Rule:MF_01605};; EC=3.1.1.31 {ECO:0000256|HAMAP-Rule:MF_01605, ECO:0000256|SAAS:SAAS00017517};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
6-phosphogluconolactonase n=2 Tax=Escherichia coli RepID=N1SNW3_ECOLX
6-phosphogluconolactonase
L2_041_000G1_scaffold_1409_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11449..12267
DNA (819bp) protein (273aa)
Phosphatase YbhA n=64 Tax=Escherichia RepID=F4SWW8_ECOLX
Phosphatase YbhA {ECO:0000313|EMBL:EOX01093.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
phosphotransferase
L2_041_000G1_scaffold_1409_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12268..13326)
DNA (1059bp) protein (353aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705};; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Molybdate transporter subunit n=78 Tax=Escherichia coli RepID=B7ULN8_ECO27
modC; molybdate transporter ATP-binding protein
L2_041_000G1_scaffold_1409_13
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13329..14018)
DNA (690bp) protein (230aa)
Molybdenum transport system permease protein modB n=344 Tax=Escherichia RepID=E2QID0_ECOLX
modB; Molybdenum transport system permease protein
Molybdenum transport system permease protein ModB {ECO:0000313|EMBL:CDC76899.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
L2_041_000G1_scaffold_1409_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14018..14791)
DNA (774bp) protein (258aa)
Molybdate-binding periplasmic protein n=397 Tax=Escherichia RepID=E2QIC9_ECOLX
modA; molybdate transporter periplasmic protein
Molybdate-binding periplasmic protein {ECO:0000313|EMBL:EOV80212.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L2_041_000G1_scaffold_1409_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14958..15107)
DNA (150bp) protein (50aa)
Multidrug efflux pump accessory protein AcrZ n=1439 Tax=Enterobacteriaceae RepID=ACRZ_ECO57
ybhT; hypothetical protein
Multidrug efflux pump accessory protein AcrZ {ECO:0000256|HAMAP-Rule:MF_01484}; AcrAB-TolC multidrug efflux pump accessory protein AcrZ {ECO:0000256|HAMAP-Rule:MF_01484}; Acridine resistance protein Z {ECO:0000256|HAMAP-Rule:MF_01484}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L2_041_000G1_scaffold_1409_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15236..16024
DNA (789bp) protein (263aa)
Transcriptional regulator modE n=48 Tax=Bacteria RepID=L3BBN6_ECOLX
ModE family transcriptional regulator
Transcriptional regulator modE {ECO:0000313|EMBL:ELJ75448.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L2_041_000G1_scaffold_1409_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16092..17564
DNA (1473bp) protein (491aa)
Molybdate ABC transporter ATP-binding protein n=25 Tax=Escherichia coli RepID=L3BDI0_ECOLX
modF; putative molybdenum transport ATP-binding protein ModF
Molybdenum ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIX62516.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_041_000G1_scaffold_1409_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17826..18842
DNA (1017bp) protein (339aa)
galE; UDP-galactose-4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Escherichia coli MS 21-1 RepID=D8ADD1_ECOLX
UDP-galactose-4-epimerase {ECO:0000313|EMBL:EZD90737.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L2_041_000G1_scaffold_1409_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18852..19898
DNA (1047bp) protein (349aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
Galactose-1-phosphate uridylyltransferase n=162 Tax=Escherichia coli RepID=E1PCU7_ECOAB
galT; galactose-1-phosphate uridylyltransferase
L2_041_000G1_scaffold_1409_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19902..21050
DNA (1149bp) protein (383aa)
galK; galactokinase (EC:2.7.1.6)
Galactokinase {ECO:0000255|HAMAP-Rule:MF_00246}; EC=2.7.1.6 {ECO:0000255|HAMAP-Rule:MF_00246};; Galactose kinase {ECO:0000255|HAMAP-Rule:MF_00246}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Galactokinase n=21 Tax=Escherichia coli RepID=L3BDR2_ECOLX
L2_041_000G1_scaffold_1409_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21044..22084
DNA (1041bp) protein (347aa)
galM; aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Aldose 1-epimerase n=318 Tax=Escherichia RepID=E2QIC2_ECOLX
L2_041_000G1_scaffold_1409_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22287..23039
DNA (753bp) protein (251aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1410 Tax=Enterobacteriaceae RepID=GPMA_ECO27
gpmA; phosphoglyceromutase
L2_041_000G1_scaffold_1409_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23205..24257)
DNA (1053bp) protein (351aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=60 Tax=Escherichia coli RepID=E2QIC0_ECOLX
L2_041_000G1_scaffold_1409_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24573..24953
DNA (381bp) protein (127aa)
Uncharacterized protein n=160 Tax=Escherichia RepID=B7MGL0_ECO45
ybgS; hypothetical protein
Putative homeobox protein {ECO:0000313|EMBL:ABE06236.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_041_000G1_scaffold_1409_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25067..26008
DNA (942bp) protein (314aa)
Zinc transporter ZitB n=49 Tax=Escherichia coli RepID=E0QVQ1_ECOLX
Zinc transporter ZitB {ECO:0000256|HAMAP-Rule:MF_00552}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
zinc transporter ZitB
L2_041_000G1_scaffold_1409_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26005..26724)
DNA (720bp) protein (240aa)
Protein pnuC n=312 Tax=Escherichia RepID=E2QIB7_ECOLX
pnuC; nicotinamide mononucleotide transporter
PnuC NMN transporter {ECO:0000313|EMBL:ABE06234.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_041_000G1_scaffold_1409_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26762..27805)
DNA (1044bp) protein (348aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00567, ECO:0000256|SAAS:SAAS00012209}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00567, ECO:0000256|SAAS:SAAS00096027};; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Quinolinate synthase A n=161 Tax=Escherichia coli RepID=NADA_ECOL6
nadA; quinolinate synthetase
L2_041_000G1_scaffold_1409_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28636..29427)
DNA (792bp) protein (264aa)
Tol-pal system protein YbgF n=276 Tax=Escherichia RepID=D5CXV0_ECOKI
ygbF; tol-pal system protein YbgF
Uncharacterized protein {ECO:0000313|EMBL:ABE06232.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_041_000G1_scaffold_1409_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29437..29958)
DNA (522bp) protein (174aa)
Peptidoglycan-associated lipoprotein n=378 Tax=Escherichia RepID=E2QIB4_ECOLX
pal; peptidoglycan-associated outer membrane lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:ABE06231.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L2_041_000G1_scaffold_1409_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29993..31285)
DNA (1293bp) protein (431aa)
Protein TolB n=1345 Tax=Enterobacteriaceae RepID=TOLB_ECO24
tolB; Translocation protein
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
Displaying items 1-30 of 66 in total

View Taxonomy