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L2_041_000G1_scaffold_1821

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1821_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..852
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABX3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29637.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Na+/H+ antiporter family
L2_041_000G1_scaffold_1821_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(941..1453)
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1X4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP52557.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_041_000G1_scaffold_1821_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2172..4115
DNA (1944bp) protein (648aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Clostridium butyricum RepID=B1R1X3_CLOBU
L2_041_000G1_scaffold_1821_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4201..5508
DNA (1308bp) protein (436aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metG2; methionine--tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA72_CLOBU
Methionyl-tRNA synthetase suspected. See adjacent gene [L2_041_000G1_scaffold_1821_3].
L2_041_000G1_scaffold_1821_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5675..6460
DNA (786bp) protein (262aa)
Hydrolase, TatD family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K196_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97799.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Mg-dependent deoxyribonuclease TatD family
L2_041_000G1_scaffold_1821_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6893..7951
DNA (1059bp) protein (353aa)
G5/3D domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9C8_CLOBU
Cell wall-binding protein {ECO:0000313|EMBL:KJZ84702.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
3D domain-containing protein
L2_041_000G1_scaffold_1821_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8179..8754
DNA (576bp) protein (192aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rnmV; ribonuclease M5 (EC:3.1.26.8)
Ribonuclease M5 n=4 Tax=Clostridium butyricum RepID=B1R1W9_CLOBU
L2_041_000G1_scaffold_1821_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8755..9600
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rsmA; ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=4 Tax=Clostridium butyricum RepID=B1R1W8_CLOBU
L2_041_000G1_scaffold_1821_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9736..11253
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEL0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29629.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_000G1_scaffold_1821_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11269..11829
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1W6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29628.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_000G1_scaffold_1821_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11939..12709
DNA (771bp) protein (257aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
lgt1; prolipoprotein diacylglyceryl transferase Lgt (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9C5_CLOBU
L2_041_000G1_scaffold_1821_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12723..13529
DNA (807bp) protein (269aa)
Lipoprotein n=2 Tax=Clostridium butyricum RepID=M8J5M8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92351.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_041_000G1_scaffold_1821_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13547..14392
DNA (846bp) protein (282aa)
Mrp protein n=4 Tax=Clostridium butyricum RepID=B1R1W3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92350.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
mrp; protein Mrp
L2_041_000G1_scaffold_1821_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14692..14880
DNA (189bp) protein (63aa)
Ferredoxin n=4 Tax=Clostridium butyricum RepID=B1R1W1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92353.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ferredoxin
L2_041_000G1_scaffold_1821_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14944..15150)
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1W0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29623.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_000G1_scaffold_1821_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15259..15717)
DNA (459bp) protein (153aa)
Transcriptional regulator, PadR family n=2 Tax=Clostridium butyricum RepID=M8K9C0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29622.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, PadR family
L2_041_000G1_scaffold_1821_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15720..16565)
DNA (846bp) protein (282aa)
DegV family protein n=4 Tax=Clostridium butyricum RepID=B1R1V8_CLOBU
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENZ29621.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DegV domain-containing protein
L2_041_000G1_scaffold_1821_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16931..19039
DNA (2109bp) protein (703aa)
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Clostridium butyricum RepID=B1R1V7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84692.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
anaerobic ribonucleoside triphosphate reductase
L2_041_000G1_scaffold_1821_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19266..20339
DNA (1074bp) protein (358aa)
Homocitrate synthase n=4 Tax=Clostridium butyricum RepID=B1R1V6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92918.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
aksA; trans-homoaconitate synthase
L2_041_000G1_scaffold_1821_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20472..21491
DNA (1020bp) protein (340aa)
Aconitate hydratase {ECO:0000313|EMBL:KHD15161.1}; EC=4.2.1.3 {ECO:0000313|EMBL:KHD15161.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9ZZF0_CLOBU
aconitate hydratase
L2_041_000G1_scaffold_1821_21

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21506..22162
DNA (657bp) protein (219aa)
leuC2; 3-isopropylmalate dehydratase large subunit 1 (EC:4.2.1.33)
Putative aconitate hydratase n=2 Tax=Clostridium butyricum RepID=B1R1V5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16546.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 21 items

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