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L2_041_000G1_scaffold_1880

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1880_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(104..1060)
DNA (957bp) protein (319aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A7UYD1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO56016.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
DNA primase
L2_041_000G1_scaffold_1880_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1292..2482)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=12 Tax=root RepID=A7UYD3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY74358.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L2_041_000G1_scaffold_1880_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2487..2801)
DNA (315bp) protein (105aa)
Transcriptional regulator, AlpA family n=14 Tax=root RepID=A7UYD4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY74359.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L2_041_000G1_scaffold_1880_4
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2971..3912)
DNA (942bp) protein (314aa)
Uncharacterized protein n=9 Tax=root RepID=A7UYD5_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EEO49112.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L2_041_000G1_scaffold_1880_5
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3920..5257)
DNA (1338bp) protein (446aa)
Site-specific recombinase, phage integrase family n=9 Tax=root RepID=A7UYD6_BACUN
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEO49114.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
putative integrase
L2_041_000G1_scaffold_1880_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5711..6619
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9L0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88317.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_1880_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6745..7032
DNA (288bp) protein (96aa)
DNA binding domain, excisionase family n=8 Tax=Bacteroidales RepID=A7A9K9_9PORP
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EKN31116.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
DNA binding domain, excisionase family
L2_041_000G1_scaffold_1880_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7038..8111
DNA (1074bp) protein (358aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A7A9K8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88315.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_1880_9
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8275..9240
DNA (966bp) protein (322aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A7A9K7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGF59588.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
DNA primase (bacterial type)
L2_041_000G1_scaffold_1880_10
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9387..9770
DNA (384bp) protein (128aa)
Bacterial mobilization protein MobC n=4 Tax=Bacteroidales RepID=A7A9K6_9PORP
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EGF59589.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
Bacterial mobilisation protein (MobC).
L2_041_000G1_scaffold_1880_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9736..10656
DNA (921bp) protein (307aa)
Relaxase/mobilization nuclease domain protein n=3 Tax=Bacteroidales RepID=A7A9K5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EPH22004.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Relaxase/mobilization nuclease
L2_041_000G1_scaffold_1880_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10661..11380
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9K4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88311.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_1880_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11469..12422)
DNA (954bp) protein (318aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6C2V3_9PORP
Putative membrane protein {ECO:0000313|EMBL:EDN88310.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_1880_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12412..12918)
DNA (507bp) protein (169aa)
DoxX family protein n=2 Tax=Parabacteroides merdae RepID=A7A9K2_9PORP
DoxX family protein {ECO:0000313|EMBL:EDN88309.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DoxX family protein
L2_041_000G1_scaffold_1880_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13029..13616)
DNA (588bp) protein (196aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Parabacteroides merdae RepID=A7A9K1_9PORP
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDN88308.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
short-chain dehydrogenase/reductase SDR
L2_041_000G1_scaffold_1880_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13564..13755)
DNA (192bp) protein (64aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Parabacteroides merdae RepID=A7A9K1_9PORP
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDN88308.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_041_000G1_scaffold_1880_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13787..14482)
DNA (696bp) protein (232aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Parabacteroides merdae RepID=A7A9K0_9PORP
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDN88307.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
short-chain dehydrogenase/reductase SDR
L2_041_000G1_scaffold_1880_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14547..15467
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6B3I5_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN88306.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
AraC family transcriptional regulator
L2_041_000G1_scaffold_1880_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15618..16757)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7A9J7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88304.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_041_000G1_scaffold_1880_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16783..17721)
DNA (939bp) protein (313aa)
Site-specific recombinase, phage integrase family n=2 Tax=Parabacteroides merdae RepID=A7A9J6_9PORP
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDN88303.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Site-specific recombinase XerD
L2_041_000G1_scaffold_1880_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17699..18007)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K5ZVU5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31102.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
integrase
L2_041_000G1_scaffold_1880_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18423..18596
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5M0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC98250.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
acyl-transferase
L2_041_000G1_scaffold_1880_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18605..19456
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y294_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12547.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_041_000G1_scaffold_1880_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19492..19650
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7A9J2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12548.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_041_000G1_scaffold_1880_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19777..23172
DNA (3396bp) protein (1132aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X092_9PORP
two-component system sensor histidine kinase
L2_041_000G1_scaffold_1880_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23200..24309
DNA (1110bp) protein (370aa)
L-fucose:H+ symporter permease n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B5L8_9PORP
L-fucose:H+ symporter permease {ECO:0000313|EMBL:CDD12550.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
major facilitator transporter
L2_041_000G1_scaffold_1880_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24383..25264)
DNA (882bp) protein (294aa)
Kinase, PfkB family n=5 Tax=Parabacteroides RepID=A7ACH5_9PORP
Kinase, PfkB family {ECO:0000313|EMBL:EEC98247.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
ribokinase
L2_041_000G1_scaffold_1880_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25852..26421
DNA (570bp) protein (190aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BFJ1_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDN87514.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
RNA polymerase sigma-70 factor
L2_041_000G1_scaffold_1880_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26490..27473
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WN05_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12553.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L2_041_000G1_scaffold_1880_30
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27621..29639
DNA (2019bp) protein (673aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KBL4_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CDB70860.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
TonB-linked outer membrane protein, SusC/RagA family
Displaying items 1-30 of 54 in total

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