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L2_041_000G1_scaffold_1951

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1951_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31..1368)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AJH7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32267.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Histidine kinase, HAMP region:chemotaxis sensory transducer precursor
L2_041_000G1_scaffold_1951_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1617..1826
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9YXD0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32266.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
FeoA family protein
L2_041_000G1_scaffold_1951_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1861..2082
DNA (222bp) protein (74aa)
Ferrous iron transport protein A n=3 Tax=Clostridium butyricum RepID=C4IBY1_CLOBU
Ferrous iron transport protein A {ECO:0000313|EMBL:KJZ84157.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_000G1_scaffold_1951_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2200..4350
DNA (2151bp) protein (717aa)
Ferrous iron transport protein B n=2 Tax=Clostridium butyricum RepID=M8J504_CLOBU
Ferrous iron transporter B {ECO:0000313|EMBL:ENZ32264.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ferrous iron transport protein B
L2_041_000G1_scaffold_1951_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4905..5822
DNA (918bp) protein (306aa)
Ribokinase n=2 Tax=Clostridium butyricum RepID=M8JDR0_CLOBU
Ribokinase {ECO:0000313|EMBL:ENZ32262.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rbsK; ribokinase
L2_041_000G1_scaffold_1951_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5839..6234
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
D-ribose pyranase n=2 Tax=Clostridium butyricum RepID=M8JF31_CLOBU
D-ribose pyranase
L2_041_000G1_scaffold_1951_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6248..7756
DNA (1509bp) protein (503aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Ribose import ATP-binding protein RbsA n=3 Tax=Clostridium butyricum RepID=B1R1N5_CLOBU
ABC transporter related protein
L2_041_000G1_scaffold_1951_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7777..8709
DNA (933bp) protein (311aa)
UPI0003D5FECE related cluster n=1 Tax=unknown RepID=UPI0003D5FECE
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:ETI87677.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rbsC; ribose ABC transporter permease
L2_041_000G1_scaffold_1951_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8836..9744
DNA (909bp) protein (303aa)
D-ribose-binding protein n=3 Tax=Clostridium butyricum RepID=B1R1N3_CLOBU
Ribose ABC transport system, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:KJZ84140.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ribose ABC transporter periplasmicD-ribose-binding protein
L2_041_000G1_scaffold_1951_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9796..10131
DNA (336bp) protein (112aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
fructose-6-phosphate aldolase, TalC/MipB family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDR6_CLOBU
L2_041_000G1_scaffold_1951_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10383..12374
DNA (1992bp) protein (664aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
tkt1; transketolase Tkt (EC:2.2.1.1)
Transketolase n=2 Tax=Clostridium butyricum RepID=B1R1N1_CLOBU
L2_041_000G1_scaffold_1951_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12550..13233
DNA (684bp) protein (228aa)
Catabolite control protein A n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4S8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94072.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional regulator, LacI family
L2_041_000G1_scaffold_1951_13
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13309..13806)
DNA (498bp) protein (166aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Clostridium butyricum RepID=M8K8I7_CLOBU
L2_041_000G1_scaffold_1951_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13941..16058)
DNA (2118bp) protein (706aa)
Ribonucleotide reductase of class III (Anaerobic), large subunit {ECO:0000313|EMBL:KJZ84206.1}; EC=1.17.4.2 {ECO:0000313|EMBL:KJZ84206.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridium butyricum RepID=M8K0G6_CLOBU
L2_041_000G1_scaffold_1951_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16357..17298
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDS1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94106.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
multimeric flavodoxin WrbA fused to cytochrome c-like domain protein
L2_041_000G1_scaffold_1951_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17454..19529
DNA (2076bp) protein (692aa)
Sensory box histidine kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JF41_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84155.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two-component sensor kinase
L2_041_000G1_scaffold_1951_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19944..20672
DNA (729bp) protein (243aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=3 Tax=Clostridium butyricum RepID=B1R1M5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84181.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_000G1_scaffold_1951_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20923..22065
DNA (1143bp) protein (381aa)
XylR transcriptional regulator n=2 Tax=Clostridium butyricum RepID=B1R1M4_CLOBU
ROK family protein {ECO:0000313|EMBL:EEP56465.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ROK family protein
L2_041_000G1_scaffold_1951_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22422..23105
DNA (684bp) protein (228aa)
Putative membrane protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4K2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92147.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
L2_041_000G1_scaffold_1951_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23284..24258
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJF8_CLOBU
Polysaccharide ABC transporter permease {ECO:0000313|EMBL:KJZ84173.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family
L2_041_000G1_scaffold_1951_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24283..25170
DNA (888bp) protein (296aa)
Protein LplC n=2 Tax=Clostridium butyricum RepID=M8K074_CLOBU
Transmembrane lipoprotein {ECO:0000313|EMBL:KJZ84175.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L2_041_000G1_scaffold_1951_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25280..26008
DNA (729bp) protein (243aa)
Polysaccharide ABC transporter substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDI6_CLOBU
Polysaccharide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJZ84163.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC-type sugar transport system, periplasmic component
Displaying 22 items

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