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L2_041_000G1_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_33_1
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..447)
DNA (447bp) protein (149aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VPA6_CLOBI
Sodium:proton antiporter {ECO:0000313|EMBL:KGJ48872.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
Na+/H+ antiporter NhaC
L2_041_000G1_scaffold_33_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(561..1754)
DNA (1194bp) protein (398aa)
Methionine gamma-lyase {ECO:0000313|EMBL:EQK45017.1}; EC=4.4.1.11 {ECO:0000313|EMBL:EQK45017.1};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
mdeA2; methionine gamma-lyase MdeA (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VWE0_CLOBI
L2_041_000G1_scaffold_33_3
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2087..3661)
DNA (1575bp) protein (525aa)
Sensory box protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VID9_CLOBI
Sensory box protein {ECO:0000313|EMBL:EQK41253.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
transcriptional regulator
L2_041_000G1_scaffold_33_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4003..4818)
DNA (816bp) protein (272aa)
CAAX protease self-immunity family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DBS9_CLODI
CAAX protease self-immunity family protein {ECO:0000313|EMBL:EQF24005.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L2_041_000G1_scaffold_33_5
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5268..6671)
DNA (1404bp) protein (468aa)
Amino acid carrier family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E003_CLOSO
Sodium:alanine symporter family protein {ECO:0000313|EMBL:CEP80956.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
putative sodium/amino acid symporter
L2_041_000G1_scaffold_33_6
unknown

Not on your lists

6813..7073
DNA (261bp) protein (87aa)

This feature has no annotations

L2_041_000G1_scaffold_33_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7194..7529)
DNA (336bp) protein (112aa)
cupin n=1 Tax=Clostridium sp. JC122 RepID=UPI000287E98B
Cupin {ECO:0000313|EMBL:CEQ04509.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
cupin 2 domain-containing protein
L2_041_000G1_scaffold_33_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7533..7871)
DNA (339bp) protein (113aa)
cupin n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A30EE
Cupin domain protein {ECO:0000313|EMBL:EQK44026.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cupin 2 conserved barrel domain-containing protein
L2_041_000G1_scaffold_33_9
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7914..8606)
DNA (693bp) protein (231aa)
ABC transporter related n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TMC1_ALKMQ
ABC transporter {ECO:0000313|EMBL:KJF26996.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
ABC transporter-like protein
L2_041_000G1_scaffold_33_10
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8578..9357)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24TW8_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE84524.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L2_041_000G1_scaffold_33_11
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(9329..10315)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JNZ5_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF26126.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
hypothetical protein
L2_041_000G1_scaffold_33_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10360..14211)
DNA (3852bp) protein (1284aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LZU5_CLOB8
putative CoA-substrate-specific enzyme activase
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:ABR35875.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_041_000G1_scaffold_33_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14312..14998
DNA (687bp) protein (229aa)
cAMP-binding protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MQU4_9CLOT
cAMP-binding protein
cAMP-binding protein {ECO:0000313|EMBL:AGF58558.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L2_041_000G1_scaffold_33_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15321..16076
DNA (756bp) protein (252aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3DR05_CLODI
4Fe-4S binding domain protein {ECO:0000313|EMBL:EQF28836.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L2_041_000G1_scaffold_33_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16177..17058)
DNA (882bp) protein (294aa)
Proline iminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; Short=PIP {ECO:0000256|PIRNR:PIRNR005539};; EC=3.4.11.5 {ECO:0000256|PIRNR:PIRNR005539};; Prolyl aminopeptidase {ECO:0000256|PIRNR:PIRNR005539}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
pepI; proline iminopeptidae (EC:3.4.11.5)
Proline iminopeptidase n=2 Tax=Clostridium sordellii RepID=T0CH93_CLOSO
L2_041_000G1_scaffold_33_16
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17443..18288)
DNA (846bp) protein (282aa)
Acetylxylan esterase related enzyme n=1 Tax=Bacillus atrophaeus UCMB-5137 RepID=R0PI96_BACAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79792.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L2_041_000G1_scaffold_33_17
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18472..18729)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1A3_CLOA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS79793.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L2_041_000G1_scaffold_33_18
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19025..20269)
DNA (1245bp) protein (415aa)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium intestinale URNW RepID=U2Q457_9CLOT
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KGK81947.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
oxygen-independent coproporphyrinogen III oxidase
L2_041_000G1_scaffold_33_19
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20279..21181)
DNA (903bp) protein (301aa)
Metallo cofactor biosynthesis protein n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BBY7_CLOBO
Metallo cofactor biosynthesis protein {ECO:0000313|EMBL:KGK81946.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
metallo cofactor biosynthesis protein
L2_041_000G1_scaffold_33_20
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21548..21739)
DNA (192bp) protein (64aa)
Fdx n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKP3_CLOSH
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AGC68685.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L2_041_000G1_scaffold_33_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21834..23552)
DNA (1719bp) protein (573aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Hydroxylamine reductase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BF50_CLOPF
hydroxylamine reductase
L2_041_000G1_scaffold_33_22
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23841..24281)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000376DC37
Uncharacterized protein {ECO:0000313|EMBL:KHS55551.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
hypothetical protein
L2_041_000G1_scaffold_33_23
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24554..26020)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CL23_CLOSO
Putative chemotaxis response regulator {ECO:0000313|EMBL:CEN76840.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L2_041_000G1_scaffold_33_24
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26030..27892)
DNA (1863bp) protein (621aa)
Poly(Glycerophosphate) glycerophosphotransferase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CLV6_CLOSO
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:CEQ18989.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L2_041_000G1_scaffold_33_25
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28491..29210)
DNA (720bp) protein (240aa)
Metal dependent hydrolase n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q893D2_CLOTE
Metal dependent hydrolase {ECO:0000313|EMBL:CEK30025.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
metal dependent hydrolase
L2_041_000G1_scaffold_33_26
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29323..29598)
DNA (276bp) protein (92aa)
Mor transcription activator family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4V5P1_CLOBI
Histidine kinase {ECO:0000313|EMBL:KGJ49436.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
homeodomain-like protein
L2_041_000G1_scaffold_33_27
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29941..30306
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E8X3_CLOSO
Protein of uncharacterised function (DUF3796) {ECO:0000313|EMBL:CEN23214.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L2_041_000G1_scaffold_33_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30312..30518
DNA (207bp) protein (69aa)
Helix-turn-helix family protein n=2 Tax=Clostridium bifermentans RepID=T4VU01_CLOBI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQK44172.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
transcriptional regulator
L2_041_000G1_scaffold_33_29
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31300..31860)
DNA (561bp) protein (187aa)
Putative lipoprotein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VHM7_CLOBI
Putative lipoprotein {ECO:0000313|EMBL:EQK40271.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L2_041_000G1_scaffold_33_30
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32225..33412)
DNA (1188bp) protein (396aa)
amidohydrolase (EC:3.5.1.-)
Amidohydrolase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D716_CLODI
Amidohydrolase {ECO:0000313|EMBL:KHS58583.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
Displaying items 1-30 of 182 in total

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