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L2_041_000G1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_162_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(184..774)
DNA (591bp) protein (197aa)
sirC; Precorrin-2 dehydrogenase (EC:1.3.1.76)
Precorrin-2 dehydrogenase {ECO:0000313|EMBL:CAJ70321.1}; EC=1.3.1.76 {ECO:0000313|EMBL:CAJ70321.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Siroheme synthase, N-terminal domain protein n=1 Tax=Clostridium difficile CD22 RepID=T2V5S0_CLODI
L2_041_000G1_scaffold_162_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(877..2391)
DNA (1515bp) protein (505aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EFH08997.1}; EC=2.1.1.107 {ECO:0000313|EMBL:EFH08997.1};; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
cobA_+_hemD; bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase n=6 Tax=Clostridium difficile RepID=D5PZC1_CLODI
L2_041_000G1_scaffold_162_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2381..3286)
DNA (906bp) protein (302aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
Porphobilinogen deaminase n=8 Tax=Clostridium difficile RepID=G6BVC0_CLODI
L2_041_000G1_scaffold_162_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3308..4030)
DNA (723bp) protein (241aa)
Sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:CCK95916.1}; EC=4.99.1.3 {ECO:0000313|EMBL:CCK95916.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
Precorrin-2 C20-methyltransferase n=2 Tax=Clostridium difficile RepID=T4PC28_CLODI
sirohydrochlorin cobaltochelatase
L2_041_000G1_scaffold_162_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4076..4846)
DNA (771bp) protein (257aa)
Precorrin-2 C20-methyltransferase n=1 Tax=Clostridium difficile CD69 RepID=T2ZZH4_CLODI
Precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:EHJ34009.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
sirohydrochlorin cobaltochelatase
L2_041_000G1_scaffold_162_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4866..5618)
DNA (753bp) protein (251aa)
Precorrin-6x reductase {ECO:0000313|EMBL:EQE58945.1}; EC=1.3.1.54 {ECO:0000313|EMBL:EQE58945.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Precorrin-6x reductase n=1 Tax=Clostridium difficile CD69 RepID=T2ZYF9_CLODI
cbiJ; cobalt-precorrin-6a reductase
L2_041_000G1_scaffold_162_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5615..6340)
DNA (726bp) protein (242aa)
Cobalt-precorrin-3B C(17)-methyltransferase (Cobalt-precorrin-3 methyltransferase) (Cobalt-precorrin-3 methylase) {ECO:0000313|EMBL:CCL31659.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCL31659.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Cobalt-precorrin-3B C(17)-methyltransferase n=3 Tax=Clostridium difficile RepID=T3NXZ9_CLODI
cbiH; cobalt-precorrin-3b c(17)-methyltransferase
L2_041_000G1_scaffold_162_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6337..7512)
DNA (1176bp) protein (392aa)
Cobalamin biosynthesis protein CbiG n=1 Tax=Clostridium difficile T17 RepID=U4ACW0_CLODI
cbiG; Cobalamin biosynthesis protein CbiG
Cobalamin synthesis G family protein {ECO:0000313|EMBL:EQE58855.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L2_041_000G1_scaffold_162_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7496..8248)
DNA (753bp) protein (251aa)
Cobalt-precorrin-4 C(11)-methyltransferase (Cobalt-precorrin-3 methylase) {ECO:0000313|EMBL:CCL31661.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCL31661.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Precorrin-4 C11-methyltransferase n=1 Tax=Clostridium difficile CD69 RepID=T2ZYD3_CLODI
cbiF; precorrin-4 C(11)-methyltransferase
L2_041_000G1_scaffold_162_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8253..8855)
DNA (603bp) protein (201aa)
Precorrin-6Y C5,15-methyltransferase (Decarboxylating), CbiT subunit n=1 Tax=Clostridium difficile CD69 RepID=T2ZYZ5_CLODI
cbiT; cobalt-precorrin-6Y C(15)-methyltransferase
Precorrin-6Y C5,15-methyltransferase, CbiT subunit {ECO:0000313|EMBL:EHJ34014.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L2_041_000G1_scaffold_162_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8848..9465)
DNA (618bp) protein (206aa)
Cobalt-precorrin-6Y C(5)-methyltransferase (Cobalt-precorrin-6 methyltransferase) (Cobalt-precorrin-6Y methylase) {ECO:0000313|EMBL:CDS89728.1}; EC=2.1.1.- {ECO:0000313|EMBL:CDS89728.1};; Putative cobalt-precorrin-6y C(5)-methyltransferase {ECO:0000313|EMBL:CDS89917.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=31 Tax=Clostridium difficile RepID=T2TAW7_CLODI
cbiE; cobalt-precorrin-6Y C(5)-methyltransferase
L2_041_000G1_scaffold_162_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9462..10619)
DNA (1158bp) protein (386aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Cobalt-precorrin-6A synthase (Deacetylating) n=3 Tax=Clostridium difficile RepID=U3XNP2_CLODI
cbiD; cobalt-precorrin-6A synthase
L2_041_000G1_scaffold_162_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10628..11260)
DNA (633bp) protein (211aa)
Cobalt-precorrin-8X methylmutase {ECO:0000313|EMBL:EQF22850.1}; EC=5.4.1.- {ECO:0000313|EMBL:EQF22850.1};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
cbiC; cobalt-precorrin-8X methylmutase (EC:5.4.1.-)
Cobalt-precorrin-8X methylmutase n=1 Tax=Clostridium difficile CD160 RepID=T3D8E6_CLODI
L2_041_000G1_scaffold_162_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11247..12191)
DNA (945bp) protein (315aa)
GHMP kinase, N-terminal domain protein n=6 Tax=Clostridium difficile RepID=D5PZD3_CLODI
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EFH08878.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
cobalamin biosynthesis kinase
L2_041_000G1_scaffold_162_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12194..13261)
DNA (1068bp) protein (356aa)
cobD; threonine-phosphate decarboxylase (EC:4.1.1.81)
Aminotransferase class I and II family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D8C9_CLODI
Aminotransferase class I and II family protein {ECO:0000313|EMBL:EQF22835.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L2_041_000G1_scaffold_162_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13360..14319)
DNA (960bp) protein (320aa)
Cobalamin biosynthesis protein CobD n=28 Tax=Clostridium difficile RepID=T2W8Y1_CLODI
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
cbiB; cobalamin biosynthesis protein
L2_041_000G1_scaffold_162_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14322..15719)
DNA (1398bp) protein (466aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Clostridium difficile CD160 RepID=T3D8D4_CLODI
cbiA; cobyrinic acid a,c-diamide synthase
L2_041_000G1_scaffold_162_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15752..17266)
DNA (1515bp) protein (505aa)
Cobyric acid synthase n=1 Tax=Clostridium difficile CD160 RepID=T3D8V0_CLODI
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
cobQ; cobyric acid synthase
L2_041_000G1_scaffold_162_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17565..18239)
DNA (675bp) protein (225aa)
Cobalamin biosynthesis phosphoglycerate mutase CobC {ECO:0000313|EMBL:CCK95930.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCK95930.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
Phosphoglycerate mutase family protein n=6 Tax=Clostridium difficile RepID=D5PZD8_CLODI
cobalamin biosynthesis phosphoglycerate mutase
L2_041_000G1_scaffold_162_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18258..19025)
DNA (768bp) protein (256aa)
cobS; cobalamin synthase CobS (EC:2.-.-.-)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Cobalamin synthase n=6 Tax=Clostridium difficile RepID=G6B3E1_CLODI
L2_041_000G1_scaffold_162_21
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19028..19591)
DNA (564bp) protein (188aa)
Bifunctional adenosylcobalamin biosynthesis protein {ECO:0000313|EMBL:CEQ19638.1}; EC=2.7.1.156 {ECO:0000313|EMBL:CEQ19638.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Cobinamide kinase / cobinamide phosphate guanyltransferase family protein n=2 Tax=Clostridium sordellii RepID=T0DPV6_CLOSO
cobU; bifunctional adenosylcobalamin biosynthesis protein
L2_041_000G1_scaffold_162_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19595..20641)
DNA (1047bp) protein (349aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=6 Tax=Clostridium difficile RepID=D5PZE1_CLODI
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L2_041_000G1_scaffold_162_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20894..21085
DNA (192bp) protein (64aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6B3E4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ34027.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
uncharacterised protein
L2_041_000G1_scaffold_162_24
unknown

Not on your lists

comp(21112..21231)
DNA (120bp) protein (40aa)
conserved hypothetical protein
L2_041_000G1_scaffold_162_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21479..22627)
DNA (1149bp) protein (383aa)
C-terminal processing peptidase family protein {ECO:0000313|EMBL:EQF22797.1}; EC=3.4.21.- {ECO:0000313|EMBL:EQF22797.1};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
C-terminal processing peptidase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D7I0_CLODI
exported carboxy-terminal processing protease
L2_041_000G1_scaffold_162_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22787..23347
DNA (561bp) protein (187aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
5-formyltetrahydrofolate cyclo-ligase n=7 Tax=Clostridium difficile RepID=D5PZF9_CLODI
5-formyltetrahydrofolate cyclo-ligase
L2_041_000G1_scaffold_162_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23457..23873)
DNA (417bp) protein (139aa)
Uncharacterized protein n=202 Tax=Clostridium difficile RepID=T3G078_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL31696.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L2_041_000G1_scaffold_162_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24038..25159)
DNA (1122bp) protein (374aa)
Putative membrane protein n=1 Tax=Clostridium difficile CD160 RepID=T3D4M8_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQF22809.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L2_041_000G1_scaffold_162_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25715..26647)
DNA (933bp) protein (311aa)
Transketolase, pyridine binding subunit {ECO:0000313|EMBL:CCK88807.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CCK88807.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
tkt2; Transketolase, pyridine binding subunit (EC:2.2.1.1)
Transketolase, pyridine binding domain protein n=6 Tax=Clostridium difficile RepID=D5PZG2_CLODI
L2_041_000G1_scaffold_162_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26640..27467)
DNA (828bp) protein (276aa)
Transketolase, thiamine diphosphate binding subunit n=2 Tax=Clostridium difficile RepID=U3WFQ2_CLODI
tkt; transketolase, thiamine disphosphate-binding subunit
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EFH14996.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
Displaying items 1-30 of 91 in total

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