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L2_041_000G1_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_175_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(398..1639)
DNA (1242bp) protein (414aa)
Peptidase propeptide and YPEB domain protein n=18 Tax=Clostridium difficile RepID=T4ALM7_CLODI
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EQH98481.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
cell surface protein
L2_041_000G1_scaffold_175_2
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2215..2499
DNA (285bp) protein (95aa)
Putative quinol monooxygenase ygiN {ECO:0000313|EMBL:KJF21738.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJF21738.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
Antibiotic biosynthesis monooxygenase n=1 Tax=Clostridium intestinale URNW RepID=U2Q871_9CLOT
hypothetical protein
L2_041_000G1_scaffold_175_3
Carnobacterium maltaromaticum, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2754..3779)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E3U3_CARML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO10950.2}; TaxID=1234679 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium maltaromaticum LMA28.;"
L2_041_000G1_scaffold_175_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4394..5791)
DNA (1398bp) protein (466aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Asparagine--tRNA ligase n=2 Tax=Clostridium difficile RepID=T3A1R8_CLODI
asnC; asparaginyl-tRNA synthetase
L2_041_000G1_scaffold_175_5
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6508..7023
DNA (516bp) protein (172aa)
Phage-related protein n=2 Tax=Clostridium kluyveri RepID=A5MYL3_CLOK5
hypothetical protein
Phage-related protein {ECO:0000313|EMBL:EDK33959.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L2_041_000G1_scaffold_175_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7291..7485)
DNA (195bp) protein (65aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=Q185C1_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG75338.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_041_000G1_scaffold_175_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7534..9204)
DNA (1671bp) protein (557aa)
Peptidase, S8/S53 family n=6 Tax=Clostridium difficile RepID=D5Q357_CLODI
Subtilisin-like serine germination related protease {ECO:0000313|EMBL:CCK98658.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
cspC; Subtilisin-like serine germination relatedprotease
L2_041_000G1_scaffold_175_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9216..10940)
DNA (1725bp) protein (575aa)
Peptidase, S8/S53 family n=5 Tax=Clostridium difficile RepID=D5Q356_CLODI
Subtilisin-like serine germination related protease {ECO:0000313|EMBL:CCK87563.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
cspBA; Subtilisin-like serine germination relatedprotease
L2_041_000G1_scaffold_175_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11023..12591)
DNA (1569bp) protein (523aa)
Subtilase family protein n=2 Tax=Clostridium difficile RepID=T4QBK8_CLODI
Subtilase family protein {ECO:0000313|EMBL:EQE62571.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
cspBA; germination-specific protease
L2_041_000G1_scaffold_175_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12785..14050)
DNA (1266bp) protein (422aa)
Glutamate 2,3-aminomutase {ECO:0000313|EMBL:CCK94704.1}; EC=5.4.3.- {ECO:0000313|EMBL:CCK94704.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L-lysine 2,3-aminomutase n=1 Tax=Clostridium difficile P38 RepID=T4PKI5_CLODI
lysine 2,3-aminomutase YodO family protein
L2_041_000G1_scaffold_175_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14754..16292)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BBY4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ25656.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
conserved hypothetical protein
L2_041_000G1_scaffold_175_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16561..17610
DNA (1050bp) protein (350aa)
Phosphotransferase system, EIIC n=6 Tax=Clostridium difficile RepID=D5Q344_CLODI
Putative PTS system, EIIC component {ECO:0000313|EMBL:CCK94711.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
PTS system transporter subunit IIC
L2_041_000G1_scaffold_175_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17643..19031
DNA (1389bp) protein (463aa)
Transporter, Major Facilitator Superfamily (MFS) n=2 Tax=Clostridium difficile RepID=U3WDT9_CLODI
H+ symporter family protein {ECO:0000313|EMBL:EQF24064.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
proton-dependent oligopeptide transporter
L2_041_000G1_scaffold_175_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19111..20907)
DNA (1797bp) protein (599aa)
Creatinase n=8 Tax=Clostridium difficile RepID=G6BBX9_CLODI
Creatinase {ECO:0000313|EMBL:EHJ26869.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
M24 family peptidase
L2_041_000G1_scaffold_175_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21401..23194)
DNA (1794bp) protein (598aa)
Metallopeptidase M24 family protein n=1 Tax=Clostridium difficile CD22 RepID=T2VDN8_CLODI
peptidase
Peptidase {ECO:0000313|EMBL:CBE05263.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_041_000G1_scaffold_175_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23581..24621)
DNA (1041bp) protein (347aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
PPIC-type PPIASE domain protein n=8 Tax=Clostridium difficile RepID=G6BBX6_CLODI
protein export chaperone
L2_041_000G1_scaffold_175_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24737..25669)
DNA (933bp) protein (311aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=D5Q337_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK91036.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
conserved hypothetical protein
L2_041_000G1_scaffold_175_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25738..26478)
DNA (741bp) protein (247aa)
Tyrosine phosphatase family protein n=3 Tax=Clostridium difficile RepID=T4ATR2_CLODI
Tyrosine phosphatase family protein {ECO:0000313|EMBL:EQH99077.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L2_041_000G1_scaffold_175_19
unknown

Not on your lists

26791..26952
DNA (162bp) protein (54aa)

This feature has no annotations

L2_041_000G1_scaffold_175_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27487..28542
DNA (1056bp) protein (352aa)
Sporulation integral membrane protein YtvI n=3 Tax=Clostridium difficile RepID=T3VXK2_CLODI
sporulation integral membrane protein
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EQH99078.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_041_000G1_scaffold_175_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28615..30732)
DNA (2118bp) protein (706aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
DNA topoisomerase n=2 Tax=Clostridium difficile RepID=T4AU91_CLODI
DNA topoisomerase III
L2_041_000G1_scaffold_175_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30984..31781
DNA (798bp) protein (266aa)
Uncharacterized protein n=136 Tax=Clostridium difficile RepID=Q185I9_CLOD6
putative exported protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22641.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L2_041_000G1_scaffold_175_23
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31842..32561)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VMM5_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:EQK42380.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L2_041_000G1_scaffold_175_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32752..34254)
DNA (1503bp) protein (501aa)
Putative phosphohexomutase {ECO:0000313|EMBL:CCL30530.1}; EC=5.4.2.- {ECO:0000313|EMBL:CCL30530.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein n=11 Tax=Clostridium difficile RepID=T3P3M8_CLODI
phosphoglucomutase
L2_041_000G1_scaffold_175_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34362..35012)
DNA (651bp) protein (217aa)
tal; translaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Probable transaldolase n=159 Tax=Clostridium difficile RepID=TAL_CLOD6
L2_041_000G1_scaffold_175_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35083..35655)
DNA (573bp) protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Clostridium difficile CD160 RepID=T3DBD9_CLODI
L2_041_000G1_scaffold_175_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36184..37683
DNA (1500bp) protein (500aa)
Inosine-5'-monophosphate dehydrogenase n=166 Tax=Clostridium difficile RepID=C9XLB7_CLODC
guaB; inosine 5-monophosphate dehydrogenase
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CBE05377.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L2_041_000G1_scaffold_175_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37905..39461)
DNA (1557bp) protein (519aa)
Transporter, betaine/carnitine/choline transporter family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEE0_CLOBI
Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:EQK39101.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
grdT1; glycine betaine transporter OpuD
L2_041_000G1_scaffold_175_29
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39595..39831)
DNA (237bp) protein (79aa)
grdH; betaine reductase complex component B subunit beta (EC:1.21.4.4)
SelenoB, glycine/betaine/sarcosine/D-proline reductase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CZ52_CLOSO
SelenoB, glycine/betaine/sarcosine/D-proline reductase family protein {ECO:0000313|EMBL:EQK43264.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
L2_041_000G1_scaffold_175_30
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39859..40905)
DNA (1047bp) protein (349aa)
Glycine reductase complex component B subunit gamma {ECO:0000313|EMBL:CEP81169.1}; EC=1.21.4.2 {ECO:0000313|EMBL:CEP81169.1};; EC=1.21.4.4 {ECO:0000313|EMBL:CEP81169.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
glycine reductase complex component B subunit gamma (EC:1.21.4.2)
Betaine reductase complex component B subunit beta n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E7F4_CLOSO
Displaying items 1-30 of 79 in total

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