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L2_041_000G1_scaffold_598

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_598_1
unknown

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_041_000G1_scaffold_598_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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956..1684
DNA (729bp) protein (243aa)
Cobalt transport protein CbiM n=6 Tax=Clostridium difficile RepID=D5PZQ7_CLODI
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
cobalt transport protein
L2_041_000G1_scaffold_598_3
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1674..1970
DNA (297bp) protein (99aa)
Cobalt transport protein CbiN n=1 Tax=Clostridium sp. BL8 RepID=T0PDN9_9CLOT
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
cbiN; cobalt transport protein
L2_041_000G1_scaffold_598_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1972..2670
DNA (699bp) protein (233aa)
Cobalt ABC transporter, permease protein CbiQ n=165 Tax=Clostridium difficile RepID=T3IIX1_CLODC
cbiQ1; ABC-type transport system, cobalt-specificpermease
ABC-type transport system, cobalt-specific permease {ECO:0000313|EMBL:CCK89041.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L2_041_000G1_scaffold_598_5
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2663..3499
DNA (837bp) protein (279aa)
Cobalt import ATP-binding protein CbiO {ECO:0000313|EMBL:EQK44665.1}; EC=3.6.3.- {ECO:0000313|EMBL:EQK44665.1};; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
cbiO; cobalt-specific ABC transporter ATP-binding protein (EC:3.6.3.-)
Cobalt import ATP-binding protein CbiO n=1 Tax=Clostridium difficile CD160 RepID=T3DLD8_CLODI
L2_041_000G1_scaffold_598_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3694..5958
DNA (2265bp) protein (755aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
DNA helicase, UvrD/REP type n=1 Tax=Clostridium difficile E10 RepID=U3VDB3_CLODI
pcrA; ATP-dependent DNA helicase
L2_041_000G1_scaffold_598_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5987..7297
DNA (1311bp) protein (437aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
aminopeptidase 2 (EC:3.4.11.21)
M18 family aminopeptidase n=1 Tax=Clostridium difficile CD160 RepID=T3DJ90_CLODI
L2_041_000G1_scaffold_598_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7322..8089
DNA (768bp) protein (256aa)
Patatin-like phospholipase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DJ97_CLODI
Patatin-like phospholipase family protein {ECO:0000313|EMBL:EQF27583.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L2_041_000G1_scaffold_598_9
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8140..8664
DNA (525bp) protein (175aa)
ppiB; peptidyl-prolyl cis-trans isomerase B (EC:5.2.1.8)
peptidylprolyl isomerase n=1 Tax=[Clostridium] glycolicum RepID=UPI0003659AFF
Peptidylprolyl isomerase {ECO:0000313|EMBL:KHS56450.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
L2_041_000G1_scaffold_598_10
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8959..9858)
DNA (900bp) protein (300aa)
Manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:EQK48212.1}; EC=3.6.1.1 {ECO:0000313|EMBL:EQK48212.1};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
Manganese-dependent inorganic pyrophosphatase n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W5N7_CLOBI
ppaC; manganese-dependent inorganic pyrophosphatase
L2_041_000G1_scaffold_598_11
unknown

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9971..10114
DNA (144bp) protein (48aa)

This feature has no annotations

L2_041_000G1_scaffold_598_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10647..13325
DNA (2679bp) protein (893aa)
adhE; Aldehyde-alcohol dehydrogenase (EC:1.1.1.1 1.2.1.10)
Aldehyde-alcohol dehydrogenase n=183 Tax=Clostridium difficile RepID=Q18D77_CLOD6
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L2_041_000G1_scaffold_598_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13641..13892)
DNA (252bp) protein (84aa)
Uncharacterized protein n=21 Tax=Clostridium difficile RepID=C9XK63_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ34298.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L2_041_000G1_scaffold_598_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14091..14861
DNA (771bp) protein (257aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YZM3_9CLOT
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:EGB92878.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
4Fe-4S ferredoxin
L2_041_000G1_scaffold_598_15
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15034..15765
DNA (732bp) protein (244aa)
Flagellin N-methylase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VTA5_CLOBI
Flagellin N-methylase family protein {ECO:0000313|EMBL:EQK44683.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
L2_041_000G1_scaffold_598_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15900..16712
DNA (813bp) protein (271aa)
Putative GTP pyrophosphokinase {ECO:0000313|EMBL:CCK96240.1}; EC=2.7.6.5 {ECO:0000313|EMBL:CCK96240.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
RelA/SpoT domain protein n=219 Tax=Clostridium difficile RepID=D5PZS5_CLODI
guanosine 3',5'-bis-pyrophosphate (ppGpp) synthesis/degradation protein
L2_041_000G1_scaffold_598_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16795..17484
DNA (690bp) protein (230aa)
Calcineurin-like phosphoesterase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DJ15_CLODI
Calcineurin-like phosphoesterase family protein {ECO:0000313|EMBL:EQF27503.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
phosphoesterase
L2_041_000G1_scaffold_598_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17550..18584
DNA (1035bp) protein (345aa)
Putative exported protein n=2 Tax=Clostridium difficile RepID=T2UIN4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK89098.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
hypothetical protein
L2_041_000G1_scaffold_598_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18653..19807
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD002 RepID=U3VTT3_CLODI
Methyltransferase TRM13 family protein {ECO:0000313|EMBL:EQE70102.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L2_041_000G1_scaffold_598_20
Paenibacillus sp. Aloe-11, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19936..20520)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Paenibacillus sanguinis RepID=UPI00037C1411
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:EHS58002.1}; TaxID=1050222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. Aloe-11.;"
ThiJ/PfpI domain-containing protein
L2_041_000G1_scaffold_598_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20848..21339
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DM44_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF27446.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L2_041_000G1_scaffold_598_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21562..22488)
DNA (927bp) protein (309aa)
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:EQE70081.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EQE70081.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Fructose-1,6-bisphosphate aldolase, class II n=192 Tax=Clostridium difficile RepID=D5PZU9_CLODI
fba; fructose-bisphosphate aldolase
L2_041_000G1_scaffold_598_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22681..23418
DNA (738bp) protein (246aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
rluA; Ribosomal small subunit pseudouridine synthaseA (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Clostridium difficile CD160 RepID=T3DL45_CLODI
L2_041_000G1_scaffold_598_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23464..24819
DNA (1356bp) protein (452aa)
tRNA (Uracil-5-)-methyltransferase (EC:2.1.1.35)
Putative tRNA (Uracil-5-)-methyltransferase {ECO:0000313|EMBL:CAJ67227.2}; EC=2.1.1.35 {ECO:0000313|EMBL:CAJ67227.2};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=9 Tax=Clostridium difficile RepID=T3BWT3_CLODI
L2_041_000G1_scaffold_598_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24819..24959
DNA (141bp) protein (47aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=U4A5F8_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO83463.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L2_041_000G1_scaffold_598_26
Leuconostoc gelidum, Leuconostoc, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(25283..25609)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Leuconostoc gelidum (strain JB7) RepID=J9YJS5_LEUGJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS40270.1}; TaxID=1229756 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Leuconostocaceae; Leuconostoc.;" source="Leuconostoc gelidum (strain JB7).;"
L2_041_000G1_scaffold_598_27
unknown

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25691..25837
DNA (147bp) protein (49aa)
putative cell-division FtsK/SpoIIIE-familyprotein Tn916-like, CTn1-Orf28
L2_041_000G1_scaffold_598_28
unknown

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26070..26333
DNA (264bp) protein (88aa)

This feature has no annotations

L2_041_000G1_scaffold_598_29
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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26349..26672
DNA (324bp) protein (108aa)
HNH endonuclease domain protein n=1 Tax=Streptococcus pyogenes ATCC 10782 RepID=E0PY36_STRPY
Uncharacterized protein {ECO:0000313|EMBL:EJQ43683.1}; TaxID=1053195 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG6X1-2.;"
HNH endonuclease family protein
L2_041_000G1_scaffold_598_30
unknown

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26921..27112
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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