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L2_041_000G1_scaffold_815

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_815_1
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..120)
DNA (120bp) protein (40aa)
Glutamate Aspartate transport ATP-binding protein GltL n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FU86_BURVI
Arginine transporter ATP-binding subunit {ECO:0000313|EMBL:KHD20968.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
gltL; Cystine ABC transporter, ATP-binding protein
L2_041_000G1_scaffold_815_2
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117..794)
DNA (678bp) protein (226aa)
Glutamate/aspartate ABC transporter, permease protein GltK n=1 Tax=Burkholderia thailandensis MSMB43 RepID=I6AG60_BURTH
Amino acid ABC transporter permease {ECO:0000313|EMBL:KEZ05369.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein
L2_041_000G1_scaffold_815_3
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(794..1534)
DNA (741bp) protein (247aa)
glutamate/aspartate ABC transporter permease GltJ n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000307D26A
amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP19716.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
L2_041_000G1_scaffold_815_4
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1619..2683)
DNA (1065bp) protein (355aa)
Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein n=23 Tax=Burkholderia pseudomallei RepID=C6TY85_BURPE
Glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein {ECO:0000313|EMBL:EED98255.1}; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD1.;"
glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein
L2_041_000G1_scaffold_815_5
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2731..4017)
DNA (1287bp) protein (429aa)
Glutamate dehydrogenase n=2 Tax=Burkholderia RepID=A4JBJ3_BURVG
NADP-specific glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ006.;"
L2_041_000G1_scaffold_815_6
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4194..5147)
DNA (954bp) protein (318aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39JL2_BURS3
bacterial regulatory helix-turn-helix , lysR family protein
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AIO23393.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
L2_041_000G1_scaffold_815_7
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5323..6711
DNA (1389bp) protein (463aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
adenylosuccinate lyase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A506E
L2_041_000G1_scaffold_815_8
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6963..7466)
DNA (504bp) protein (168aa)
Gluconate kinase n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WCN8_9BURK
carbohydrate kinase, thermoresistant glucokinase family protein
Gluconate kinase {ECO:0000313|EMBL:AKE04595.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
L2_041_000G1_scaffold_815_9
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7480..8841)
DNA (1362bp) protein (454aa)
permease n=1 Tax=Burkholderia ubonensis RepID=UPI00016A506A
Permease DsdX {ECO:0000313|EMBL:KFL51098.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
transporter, gluconate:H+ symporter family protein
L2_041_000G1_scaffold_815_10
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9060..9686)
DNA (627bp) protein (209aa)
eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein (EC:4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein {ECO:0000313|EMBL:AJX15670.1}; EC=4.1.2.14 {ECO:0000313|EMBL:AJX15670.1};; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
2-dehydro-3-deoxyphosphogluconate aldolase n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002FA6819
L2_041_000G1_scaffold_815_11
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9712..11568)
DNA (1857bp) protein (619aa)
Phosphogluconate dehydratase {ECO:0000313|EMBL:AJX16422.1}; EC=4.2.1.12 {ECO:0000313|EMBL:AJX16422.1};; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
edd; phosphogluconate dehydratase (EC:4.2.1.12)
phosphogluconate dehydratase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A5068
L2_041_000G1_scaffold_815_12
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11863..12720
DNA (858bp) protein (286aa)
RpiR family transcriptional regulator n=1 Tax=Burkholderia sp. TJI49 RepID=F0FYM5_9BURK
RpiR family transcriptional regulator {ECO:0000313|EMBL:EGD05665.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
RpiR family transcriptional regulator
L2_041_000G1_scaffold_815_13
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12767..13189)
DNA (423bp) protein (141aa)
membrane protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A5066
Uncharacterized protein {ECO:0000313|EMBL:KDB10395.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
hypothetical protein
L2_041_000G1_scaffold_815_14
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13207..14478)
DNA (1272bp) protein (424aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
proA; glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
gamma-glutamyl phosphate reductase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A5065
L2_041_000G1_scaffold_815_15
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14611..15708)
DNA (1098bp) protein (366aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III subunit delta {ECO:0000313|EMBL:AFQ49263.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AFQ49263.1};; TaxID=1009846 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia GG4.;"
DNA polymerase III subunit delta n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00031BD173
L2_041_000G1_scaffold_815_16
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15727..16281)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000370F993
lipopolysaccharide-assembly family protein
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186}; Flags: Precursor;; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
L2_041_000G1_scaffold_815_17
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16322..18916)
DNA (2595bp) protein (865aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
leuS; leucine--tRNA ligase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4C30
L2_041_000G1_scaffold_815_18
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19162..19611)
DNA (450bp) protein (150aa)
biopolymer transporter ExbD n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002D7DEFB
Biopolymer transporter ExbD {ECO:0000313|EMBL:KEZ05351.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
biopolymer transport protein exbD1
L2_041_000G1_scaffold_815_19
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19635..20303)
DNA (669bp) protein (223aa)
Biopolymer transport protein n=2 Tax=Burkholderia cepacia complex RepID=A2WCQ0_9BURK
Flagellar motor protein MotA {ECO:0000313|EMBL:KHL11524.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
motA/TolQ/ExbB proton channel family protein
L2_041_000G1_scaffold_815_20
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20315..21112)
DNA (798bp) protein (266aa)
dapB; 4-hydroxy-tetrahydrodipicolinate reductase (EC:1.17.1.8)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
dihydrodipicolinate reductase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4C2E
L2_041_000G1_scaffold_815_21
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21196..21990)
DNA (795bp) protein (265aa)
membrane protein SmpA n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4C2D
smpA / OmlA family protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
L2_041_000G1_scaffold_815_22
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22134..22562
DNA (429bp) protein (143aa)
Fur family transcriptional regulator n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002EC03B1
ferric uptake regulator family protein
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:EDT39730.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria MEX-5.;"
L2_041_000G1_scaffold_815_23
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22710..23234)
DNA (525bp) protein (175aa)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
ureidoglycolate hydrolase (EC:3.5.3.19)
Ureidoglycolate lyase n=2 Tax=Burkholderia multivorans RepID=B9B996_9BURK
L2_041_000G1_scaffold_815_24
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23243..24250)
DNA (1008bp) protein (336aa)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
alc; allantoicase (EC:3.5.3.4)
allantoicase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4C2A
L2_041_000G1_scaffold_815_25
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24424..25749)
DNA (1326bp) protein (442aa)
Na+/H+-dicarboxylate symporter n=1 Tax=Burkholderia sp. KJ006 RepID=I2DJU6_9BURK
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KFL51082.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
Na+/H+-dicarboxylate symporter
L2_041_000G1_scaffold_815_26
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25981..26673
DNA (693bp) protein (231aa)
GntR family transcriptional regulator n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000367A3E8
bacterial regulatory s, gntR family protein
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:AJX15593.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
L2_041_000G1_scaffold_815_27
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26776..27414)
DNA (639bp) protein (213aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Burkholderia RepID=UPI00016A4C26
gap; glyceraldehyde-3-phosphate dehydrogenase, type I
Displaying 27 items

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