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L2_041_000G1_scaffold_1329

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1329_1
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..199
DNA (198bp) protein (66aa)
trmD; tRNA (guanine(37)-N(1))-methyltransferase (EC:2.1.1.228)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
tRNA (guanine-N1)-methyltransferase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A6202
L2_041_000G1_scaffold_1329_2
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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334..723
DNA (390bp) protein (130aa)
50S ribosomal protein L19 n=28 Tax=pseudomallei group RepID=RL19_BURM7
rplS; ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
L2_041_000G1_scaffold_1329_3
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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812..1498
DNA (687bp) protein (229aa)
Putative nudix hydrolase YeaB n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FMK7_BURVI
Putative nudix hydrolase YeaB {ECO:0000313|EMBL:ERJ37881.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
hypothetical nudix hydrolase YeaB
L2_041_000G1_scaffold_1329_4
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1622..2560
DNA (939bp) protein (313aa)
Cobalamin biosynthesis protein CobD n=2 Tax=Burkholderia ambifaria RepID=B1YV62_BURA4
CobD/CbiB family protein
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=398577 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain MC40-6).;"
L2_041_000G1_scaffold_1329_5
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2674..2991)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HBS7_BURVI
Uncharacterized protein {ECO:0000313|EMBL:KDB05922.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
hypothetical protein
L2_041_000G1_scaffold_1329_6
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3063..4004)
DNA (942bp) protein (314aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HI33_BURVI
rsgA; ribosome small subunit-dependent GTPase A
L2_041_000G1_scaffold_1329_7
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4001..4321)
DNA (321bp) protein (107aa)
Macromolecule metabolism protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G3L0_BURVI
peptidase M48 family protein
Macromolecule metabolism protein {ECO:0000313|EMBL:ERJ37877.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
L2_041_000G1_scaffold_1329_8
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4334..5260)
DNA (927bp) protein (309aa)
Metallo peptidase, subfamily M48A n=4 Tax=Burkholderia cenocepacia RepID=B4EAM8_BURCJ
Peptidase M48 {ECO:0000313|EMBL:KER71263.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
subfamily M48A metalopeptidase
L2_041_000G1_scaffold_1329_9
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5378..6001
DNA (624bp) protein (208aa)
Oligoribonuclease {ECO:0000255|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00045};; TaxID=339670 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia; cepacia (strain AMMD)).;"
Oligoribonuclease n=2 Tax=Burkholderia ambifaria RepID=ORN_BURCM
oligoribonuclease
L2_041_000G1_scaffold_1329_10
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6021..6638)
DNA (618bp) protein (206aa)
Molybdenum cofactor biosynthesis protein MogA n=1 Tax=Burkholderia sp. TJI49 RepID=F0G8H5_9BURK
Molybdenum cofactor biosynthesis protein MogA {ECO:0000313|EMBL:KEA60393.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
molybdenum cofactor synthesis domain protein
L2_041_000G1_scaffold_1329_11
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6622..7233)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A667A
hypothetical protein
UPF0307 protein PL79_10210 {ECO:0000256|HAMAP-Rule:MF_00765}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
L2_041_000G1_scaffold_1329_12
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7289..8722
DNA (1434bp) protein (478aa)
Peptidase U62 modulator of DNA gyrase n=6 Tax=Burkholderia multivorans RepID=A9ADR9_BURM1
peptidase U62 modulator of DNA gyrase
Uncharacterized protein {ECO:0000313|EMBL:ABI86516.1}; TaxID=339670 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia; cepacia (strain AMMD)).;"
L2_041_000G1_scaffold_1329_13
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8853..9353)
DNA (501bp) protein (167aa)
Dihydrofolate reductase n=5 Tax=Burkholderia multivorans RepID=B9BA87_9BURK
Diacylglycerol kinase {ECO:0000313|EMBL:KHS12965.1}; TaxID=87883 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans.;"
dihydrofolate reductase family protein
L2_041_000G1_scaffold_1329_14
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9478..10965)
DNA (1488bp) protein (496aa)
Fis family transcriptional regulator n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002F7DA32
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:KDB05914.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
AAA domain family protein
L2_041_000G1_scaffold_1329_15
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10991..12367)
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000381FA80
metA-pathway of phenol degradation family protein
MetA-pathway of phenol degradation family protein {ECO:0000313|EMBL:AJX14956.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
L2_041_000G1_scaffold_1329_16
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12483..13310)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00030B17EF
Uncharacterized protein {ECO:0000313|EMBL:KDB05912.1}; Flags: Precursor;; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
hypothetical protein
L2_041_000G1_scaffold_1329_17
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13317..14027)
DNA (711bp) protein (237aa)
peptidase C39 n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0003022E02
Peptidase C39 bacteriocin processing {ECO:0000313|EMBL:KDB05911.1}; Flags: Precursor;; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
peptidase C39 family protein
L2_041_000G1_scaffold_1329_18
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14094..15539)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI000380F104
Uncharacterized protein {ECO:0000313|EMBL:KDB05910.1}; Flags: Precursor;; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
hypothetical protein
L2_041_000G1_scaffold_1329_19
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15564..16262)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00037AE3BE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJX14907.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
L2_041_000G1_scaffold_1329_20
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16259..16741)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00030D1F26
Uncharacterized protein {ECO:0000313|EMBL:KDB05908.1}; Flags: Precursor;; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
hypothetical protein
L2_041_000G1_scaffold_1329_21
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16777..17142)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI0002F6AB7E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJX14522.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
L2_041_000G1_scaffold_1329_22
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17682..18344
DNA (663bp) protein (221aa)
Fis family transcriptional regulator n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00030E71E8
Fis family transcriptional regulator {ECO:0000313|EMBL:KEZ03906.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
sigma-54 dependent trancsriptional regulator
Displaying 22 items

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