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L2_041_000G1_scaffold_4922

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_4922_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..829)
DNA (828bp) protein (276aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ribC; flavokinase/FAD synthetase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9K2_9FIRM
L2_041_000G1_scaffold_4922_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(860..1681)
DNA (822bp) protein (274aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
truB; tRNA pseudouridine synthase (EC:5.4.99.-)
tRNA pseudouridine synthase B n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9K3_9FIRM
L2_041_000G1_scaffold_4922_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1722..1901)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48330.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_4922_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1914..2876)
DNA (963bp) protein (321aa)
Phosphoesterase RecJ domain-containing protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9K5_9FIRM
Phosphoesterase RecJ domain-containing protein {ECO:0000313|EMBL:EGJ48331.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_041_000G1_scaffold_4922_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2873..3268)
DNA (396bp) protein (132aa)
Ribosome-binding factor A n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9K6_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rbfA; ribosome-binding factor A
L2_041_000G1_scaffold_4922_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(3959..4186)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YH80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14962.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
helix-turn-helix domain protein
L2_041_000G1_scaffold_4922_7
unknown

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4262..4453
DNA (192bp) protein (64aa)

This feature has no annotations

L2_041_000G1_scaffold_4922_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4564..5511)
DNA (948bp) protein (316aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9K8_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
infB; translation initiation factor IF-2
Displaying 8 items

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