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L2_041_000G1_scaffold_487

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_487_1
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..722)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77611.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
putative type III restriction enzyme
L2_041_000G1_scaffold_487_2
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(737..2494)
DNA (1758bp) protein (586aa)
Adenine specific DNA methylase Mod (EC:2.1.1.72)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1UYS2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW42850.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L2_041_000G1_scaffold_487_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2481..3029)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXP8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98797.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_041_000G1_scaffold_487_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3054..3263)
DNA (210bp) protein (70aa)
Predicted transcriptional regulator n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKY9_CLOSC
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBK78363.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_041_000G1_scaffold_487_5
unknown

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3381..3620
DNA (240bp) protein (80aa)

This feature has no annotations

L2_041_000G1_scaffold_487_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3847..4758)
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FSE6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95429.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_041_000G1_scaffold_487_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4790..5641)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FSE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94535.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_041_000G1_scaffold_487_8
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5860..6480
DNA (621bp) protein (207aa)
DNA primase n=2 Tax=Roseburia RepID=G2SZU9_ROSHA
DNA primase
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EEG92888.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L2_041_000G1_scaffold_487_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6458..7837
DNA (1380bp) protein (460aa)
Phage/plasmid primase n=2 Tax=Roseburia RepID=G2SZV0_ROSHA
Uncharacterized protein {ECO:0000313|EMBL:KGF56204.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
phage/plasmid primase
L2_041_000G1_scaffold_487_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8239..8460
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9X5I3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95436.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_041_000G1_scaffold_487_11
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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8457..9437
DNA (981bp) protein (327aa)
Plasmid recombination enzyme n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LWQ9_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:CDB86571.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Plasmid recombination enzyme.
L2_041_000G1_scaffold_487_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9421..9603
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYZ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99247.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_041_000G1_scaffold_487_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9709..11391
DNA (1683bp) protein (561aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C9J1_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFE13669.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_041_000G1_scaffold_487_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11543..12211
DNA (669bp) protein (223aa)
Putative transcriptional regulatory protein CseB n=2 Tax=Oscillibacter RepID=U2QX29_9FIRM
Putative transcriptional regulatory protein CseB {ECO:0000313|EMBL:ERK63282.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_041_000G1_scaffold_487_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12189..13709
DNA (1521bp) protein (507aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QD40_9FIRM
histidine kinase
L2_041_000G1_scaffold_487_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13750..14379
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QW44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63284.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
alpha/beta hydrolase fold family protein
L2_041_000G1_scaffold_487_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15138..15998
DNA (861bp) protein (287aa)
yxlF2; ABC transporter ATP-binding protein YxlF (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QK60_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK63285.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_041_000G1_scaffold_487_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15995..18184
DNA (2190bp) protein (730aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R341_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63286.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_041_000G1_scaffold_487_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18177..18890
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QX33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63287.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_041_000G1_scaffold_487_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18994..19839)
DNA (846bp) protein (282aa)
folD; Bifunctional protein FolD, Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5)
Bifunctional protein FolD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH3_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_487_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19843..20805)
DNA (963bp) protein (321aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
lgt; prolipoprotein diacylglycerol transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH2_9FIRM
L2_041_000G1_scaffold_487_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20808..22085)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47349.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
M16B family peptidase
L2_041_000G1_scaffold_487_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22092..23372)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47348.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M16B family protein
L2_041_000G1_scaffold_487_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23613..23978
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAG8_9FIRM
UPF0122 protein HMPREF0866_00286 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_487_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23982..25367
DNA (1386bp) protein (462aa)
Signal recognition particle protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAG7_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ffh; signal recognition particle protein
L2_041_000G1_scaffold_487_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25434..25673
DNA (240bp) protein (80aa)
30S ribosomal protein S16 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAG6_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsP; 30S ribosomal protein S16
L2_041_000G1_scaffold_487_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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25691..25921
DNA (231bp) protein (77aa)
UPF0109 protein HMPREF0866_00283 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAG5_9FIRM
UPF0109 protein HMPREF0866_00283 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_487_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26010..26507
DNA (498bp) protein (166aa)
Ribosome maturation factor RimM n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAG4_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rimM; Ribosome maturation factor RimM
L2_041_000G1_scaffold_487_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26587..28197
DNA (1611bp) protein (537aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAI3_9FIRM
two-component histidine kinase
L2_041_000G1_scaffold_487_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28200..28907
DNA (708bp) protein (236aa)
Transcriptional regulatory protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAI4_9FIRM
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Response regulator of citrate/malate metabolism
Displaying items 1-30 of 43 in total

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