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L2_041_000G1_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_545_1
Lysinibacillus sphaericus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

360..722
DNA (363bp) protein (121aa)
BlaI family transcriptional regulator n=1 Tax=Paenibacillus sp. JC66 RepID=UPI0002884CE7
CopY family transcriptional regulator {ECO:0000313|EMBL:EON72510.1}; TaxID=1285586 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus sphaericus OT4b.31.;"
BlaI family transcriptional regulator
L2_041_000G1_scaffold_545_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

734..2659
DNA (1926bp) protein (642aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7R6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35390.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
peptidase M56 family protein
L2_041_000G1_scaffold_545_3
unknown

Not on your lists

2649..2831
DNA (183bp) protein (61aa)

This feature has no annotations

L2_041_000G1_scaffold_545_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2868..4220)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45737.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_545_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4217..4795)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGD2_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_041_000G1_scaffold_545_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4992..5912
DNA (921bp) protein (307aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Glutamyl-and glutaminyl-tRNA synthetases (EC:6.1.1.- 6.1.1.17)
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGD1_9FIRM
L2_041_000G1_scaffold_545_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6120..7526
DNA (1407bp) protein (469aa)
Amino acid carrier protein n=2 Tax=Oscillibacter RepID=U2QKF1_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:ERK65350.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
amino acid carrier protein
L2_041_000G1_scaffold_545_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7747..9111
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46708.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
MatE efflux family protein
L2_041_000G1_scaffold_545_9
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

9142..9684
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IW14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY46483.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
hypothetical protein
L2_041_000G1_scaffold_545_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9761..10156)
DNA (396bp) protein (132aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9R0_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:EGJ47088.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_545_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10246..10422)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47408.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_545_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10666..11946
DNA (1281bp) protein (427aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM9_9FIRM
L2_041_000G1_scaffold_545_13
unknown

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11976..12326
DNA (351bp) protein (117aa)

This feature has no annotations

L2_041_000G1_scaffold_545_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12331..13257
DNA (927bp) protein (309aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM8_9FIRM
L2_041_000G1_scaffold_545_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13314..13739
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47405.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_545_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13753..14340
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47405.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_545_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14413..15192
DNA (780bp) protein (260aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM5_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L2_041_000G1_scaffold_545_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15185..16108
DNA (924bp) protein (308aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM4_9FIRM
L2_041_000G1_scaffold_545_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16160..16480
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47400.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_545_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16553..17725
DNA (1173bp) protein (391aa)
putative phosphoglycerate mutase/acetyltransferase (EC:5.4.2.1)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47399.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_545_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17808..18428)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45815.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_545_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18695..19024
DNA (330bp) protein (110aa)
Transcriptional regulator, PadR family n=3 Tax=Clostridiales RepID=G9YSI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33497.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative transcriptional regulator
L2_041_000G1_scaffold_545_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19038..19835
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIP7_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN01931.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_041_000G1_scaffold_545_24
unknown

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19832..20560
DNA (729bp) protein (243aa)

This feature has no annotations

L2_041_000G1_scaffold_545_25
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20579..21370
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIP7_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43910.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_041_000G1_scaffold_545_26
unknown

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21367..22131
DNA (765bp) protein (255aa)

This feature has no annotations

L2_041_000G1_scaffold_545_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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22154..23005
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CC80_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54738.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_041_000G1_scaffold_545_28
unknown

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23002..23760
DNA (759bp) protein (253aa)

This feature has no annotations

L2_041_000G1_scaffold_545_29
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23797..24684
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIP7_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX43910.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_041_000G1_scaffold_545_30
unknown

Not on your lists

24681..25409
DNA (729bp) protein (243aa)

This feature has no annotations

Displaying items 1-30 of 42 in total

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