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L2_041_000G1_scaffold_728

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_728_1
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1256)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66715.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Relaxase/mobilization nuclease family protein
L2_041_000G1_scaffold_728_2
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1256..1573)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2A5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64968.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L2_041_000G1_scaffold_728_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(1714..2730)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ASW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46038.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L2_041_000G1_scaffold_728_4
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2878..3846
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KJH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY66965.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L2_041_000G1_scaffold_728_5
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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4343..5677
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y8J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30250.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L2_041_000G1_scaffold_728_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5720..7072
DNA (1353bp) protein (451aa)
FHA domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CX80_9CLOT
FHA domain protein {ECO:0000313|EMBL:EEG56320.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
peptidase S1 and S6 chymotrypsin/Hap
L2_041_000G1_scaffold_728_7
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

7178..9181
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y2G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30248.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
serine/threonine protein kinase
L2_041_000G1_scaffold_728_8
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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9218..11179
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y2G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30248.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_041_000G1_scaffold_728_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11278..12177)
DNA (900bp) protein (300aa)
FHA domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CX81_9CLOT
FHA domain protein {ECO:0000313|EMBL:EEG56321.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_041_000G1_scaffold_728_10
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

12210..13331
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZIG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30247.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L2_041_000G1_scaffold_728_11
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

13398..14504
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZIH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30252.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Ser/Thr phosphatase
L2_041_000G1_scaffold_728_12
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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15248..16195
DNA (948bp) protein (316aa)
Putative uncharacterized protein id=3473870 bin=GWF2_Clostridiales_38_85 species=unknown genus=Sulfurovum taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L2_041_000G1_scaffold_728_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16567..17058
DNA (492bp) protein (164aa)
RNA polymerase sigma subunit SigV n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TFA5_9FIRM
RNA polymerase sigma subunit SigV {ECO:0000313|EMBL:CDC72098.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
RNA polymerase, sigma subunit, SigV
L2_041_000G1_scaffold_728_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17055..17909
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M1M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64860.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Protein of unknown function (DUF3298).
L2_041_000G1_scaffold_728_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18464..18700
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46741.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_728_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18697..18957
DNA (261bp) protein (87aa)
Pro-sigmaK processing inhibitor BofA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD44_9FIRM
Pro-sigmaK processing inhibitor BofA {ECO:0000313|EMBL:EGJ46740.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_728_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19037..19222)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46718.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_728_18
unknown

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comp(19305..19457)
DNA (153bp) protein (51aa)

This feature has no annotations

L2_041_000G1_scaffold_728_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19460..20116)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46719.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
transporter protein
L2_041_000G1_scaffold_728_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20113..20973)
DNA (861bp) protein (287aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD24_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EGJ46720.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC transporter ATPase
L2_041_000G1_scaffold_728_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20970..21362)
DNA (393bp) protein (131aa)
GntR family transcriptional regulator n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD25_9FIRM
GntR family transcriptional regulator {ECO:0000313|EMBL:EGJ46721.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_728_22
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

21590..23065
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15161.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative MerR family transcriptional regulator
L2_041_000G1_scaffold_728_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23208..24293
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
serC; Phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD43_9FIRM
L2_041_000G1_scaffold_728_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25439..26611
DNA (1173bp) protein (391aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD42_9FIRM
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EGJ46738.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative oxidoreductase
L2_041_000G1_scaffold_728_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26616..27194
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46737.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L2_041_000G1_scaffold_728_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27286..29283
DNA (1998bp) protein (666aa)
UPF0313 protein HMPREF0866_00338 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAM0_9FIRM
UPF0313 protein HMPREF0866_00338 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Fe-S oxidoreductase
L2_041_000G1_scaffold_728_27
unknown

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29314..29814
DNA (501bp) protein (167aa)

This feature has no annotations

Displaying 27 items

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