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L2_041_000G1_scaffold_831

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_831_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(684..1658)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47321.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
PhoH-like protein
L2_041_000G1_scaffold_831_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1673..2902)
DNA (1230bp) protein (410aa)
Sporulation protein YqfD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE2_9FIRM
Sporulation protein YqfD {ECO:0000313|EMBL:EGJ47320.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
yqfD; putative stage IV sporulation protein
L2_041_000G1_scaffold_831_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2913..3194)
DNA (282bp) protein (94aa)
Sporulation protein YqfC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE1_9FIRM
Sporulation protein YqfC {ECO:0000313|EMBL:EGJ47319.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_831_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3286..5463)
DNA (2178bp) protein (726aa)
Tetratricopeptide repeat protein n=2 Tax=Oscillibacter RepID=U2QLP1_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERK66463.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_041_000G1_scaffold_831_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5676..6827
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48361.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_831_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6901..8220
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48362.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted membrane protein
L2_041_000G1_scaffold_831_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8346..8777)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46953.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_831_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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8981..10357
DNA (1377bp) protein (459aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
purF; putative amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRS4_9FIRM
L2_041_000G1_scaffold_831_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10662..10916)
DNA (255bp) protein (85aa)
Transition state regulatory protein AbrB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N9_9FIRM
Transition state regulatory protein AbrB {ECO:0000313|EMBL:EGJ48365.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
AbrB family DNA-binding protein
L2_041_000G1_scaffold_831_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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11185..11763
DNA (579bp) protein (193aa)
Spore maturation protein A n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N8_9FIRM
Spore maturation protein A {ECO:0000313|EMBL:EGJ48364.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spmA; spore maturation protein A
L2_041_000G1_scaffold_831_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11766..12293
DNA (528bp) protein (176aa)
Spore maturation protein B n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9N7_9FIRM
Spore maturation protein B {ECO:0000313|EMBL:EGJ48363.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spmB; spore maturation protein B
L2_041_000G1_scaffold_831_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12681..13301)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CM98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21787.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_041_000G1_scaffold_831_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13530..14465)
DNA (936bp) protein (312aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCI6_9FIRM
Transketolase {ECO:0000313|EMBL:EGJ48297.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_831_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14467..15312)
DNA (846bp) protein (282aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCI5_9FIRM
Transketolase {ECO:0000313|EMBL:EGJ48296.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_831_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15335..16381)
DNA (1047bp) protein (349aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
galM; aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=2 Tax=Oscillibacter RepID=U2R031_9FIRM
L2_041_000G1_scaffold_831_16
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16402..17100)
DNA (699bp) protein (233aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M1C8_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EOS64834.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L2_041_000G1_scaffold_831_17
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17443..18924)
DNA (1482bp) protein (494aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
araA; L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UBU5_9FIRM
L2_041_000G1_scaffold_831_18
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19071..20660)
DNA (1590bp) protein (530aa)
Carbohydrate kinase FGGY family protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T459_9FIRM
Carbohydrate kinase FGGY family protein {ECO:0000313|EMBL:CDC68228.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Sugar (pentulose and hexulose) kinases
L2_041_000G1_scaffold_831_19
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20675..21721)
DNA (1047bp) protein (349aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TEV7_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDC68229.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
monosaccharide ABC transporter membrane protein
L2_041_000G1_scaffold_831_20
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21718..22794)
DNA (1077bp) protein (359aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T7Q8_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDC68230.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_041_000G1_scaffold_831_21
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22787..24310)
DNA (1524bp) protein (508aa)
ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TK58_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC68231.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_041_000G1_scaffold_831_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24432..25520)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74821.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_041_000G1_scaffold_831_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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26071..26823
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14982.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Transcriptional regulators
Displaying 23 items

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