ggKbase home page

L2_041_000G1_scaffold_963

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_963_1
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(130..996)
DNA (867bp) protein (289aa)
Transcriptional regulator, RpiR family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0T4_9FIRM
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EXG88481.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
hypothetical protein
L2_041_000G1_scaffold_963_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1006..1791)
DNA (786bp) protein (262aa)
Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family (EC:3.1.3.25)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46731.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_963_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1788..2618)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46199.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_963_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2636..3469)
DNA (834bp) protein (278aa)
Cobalt transport protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0T6_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:EDM98074.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
cobalt transporter
L2_041_000G1_scaffold_963_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3456..5168)
DNA (1713bp) protein (571aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0T7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM98075.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC transporter ATP-binding protein
L2_041_000G1_scaffold_963_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5174..6025)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W486_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39509.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
cell division protein FtsQ
L2_041_000G1_scaffold_963_7
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6754..8979
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5H1X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY18806.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
hypothetical protein
L2_041_000G1_scaffold_963_8
unknown

Not on your lists

9017..9355
DNA (339bp) protein (113aa)

This feature has no annotations

L2_041_000G1_scaffold_963_9
unknown

Not on your lists

9457..9675
DNA (219bp) protein (73aa)

This feature has no annotations

L2_041_000G1_scaffold_963_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9647..10810
DNA (1164bp) protein (388aa)
Putative alanine dehydrogenase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BBR5_CLOSY
Putative alanine dehydrogenase {ECO:0000313|EMBL:ERI75579.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ald; hypothetical protein
L2_041_000G1_scaffold_963_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10874..12244
DNA (1371bp) protein (457aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FD63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05679.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
sodium/glutamate symporter
L2_041_000G1_scaffold_963_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12314..13756
DNA (1443bp) protein (481aa)
Arginine utilization regulatory protein rocR n=3 Tax=Clostridium RepID=E7GNJ8_CLOSY
Arginine utilization regulatory protein rocR {ECO:0000313|EMBL:EGA93607.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator
L2_041_000G1_scaffold_963_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13896..14753
DNA (858bp) protein (286aa)
Uncharacterized protein n=3 Tax=Clostridium symbiosum RepID=E9SSA1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93606.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_041_000G1_scaffold_963_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15100..15837
DNA (738bp) protein (246aa)
RNA polymerase sigma-I factor n=2 Tax=Clostridium bolteae RepID=R0BIW3_9CLOT
RNA polymerase sigma-I factor {ECO:0000313|EMBL:ENZ50509.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L2_041_000G1_scaffold_963_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15834..16958
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z564_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15137.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L2_041_000G1_scaffold_963_16
Peptoniphilus sp. 1-1, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17135..18310
DNA (1176bp) protein (392aa)
Peptidase propeptide and YPEB domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EG64_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDZ75618.1}; TaxID=875453 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. 1-1.;"
L2_041_000G1_scaffold_963_17
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

18321..18989
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YAK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28309.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_041_000G1_scaffold_963_18
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

19014..19688
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZCT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28312.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_041_000G1_scaffold_963_19
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

19648..21153
DNA (1506bp) protein (502aa)
Spore coat protein CotH n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XX34_9FIRM
Spore coat protein CotH {ECO:0000313|EMBL:CDD28313.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
CotH protein
L2_041_000G1_scaffold_963_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21361..21804
DNA (444bp) protein (148aa)
Hsp20/alpha crystallin family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0V3_9FIRM
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:EDM98091.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Molecular chaperone (small heat shock protein)
L2_041_000G1_scaffold_963_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21947..23632)
DNA (1686bp) protein (562aa)
ATPase P (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGC2_9FIRM
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EGJ45726.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Displaying 21 items

View Taxonomy