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L2_041_000G1_scaffold_2014

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_2014_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(52..285)
DNA (234bp) protein (78aa)
Preprotein translocase, SecG subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGU4_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EGJ45583.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
secG; preprotein translocase SecG subunit
L2_041_000G1_scaffold_2014_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(416..793)
DNA (378bp) protein (126aa)
TdcF protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGU3_9FIRM
TdcF protein {ECO:0000313|EMBL:EGJ45582.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
endoribonuclease L-PSP
L2_041_000G1_scaffold_2014_3
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1004..1483
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JV97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE66717.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L2_041_000G1_scaffold_2014_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1810..2331
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45817.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_2014_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2528..4372
DNA (1845bp) protein (615aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFV7_9FIRM
hypothetical protein
L2_041_000G1_scaffold_2014_6
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4676..5095)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI00037A939E
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGR77129.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
Putative translation initiation inhibitor, yjgF family
L2_041_000G1_scaffold_2014_7
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5092..6312)
DNA (1221bp) protein (407aa)
Aspartate aminotransferase {ECO:0000313|EMBL:KGR77128.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KGR77128.1};; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
Aminotransferase, class I/II n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8W3_9CLOT
class I and II aminotransferase
L2_041_000G1_scaffold_2014_8
Oceanobacillus oncorhynchi, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6519..7490
DNA (972bp) protein (324aa)
Transcriptional regulator, LysR family n=2 Tax=Fusobacterium nucleatum RepID=D5RAL1_FUSNC
Hydrogen peroxide-inducible genes activator {ECO:0000313|EMBL:CEI82480.1}; TaxID=545501 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus oncorhynchi.;"
LysR family transcriptional regulator
L2_041_000G1_scaffold_2014_9
unknown

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7510..7875
DNA (366bp) protein (122aa)

This feature has no annotations

L2_041_000G1_scaffold_2014_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8087..8572)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35784.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
XRE family transcriptional regulator
L2_041_000G1_scaffold_2014_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8660..10045)
DNA (1386bp) protein (462aa)
GntR family transcriptional regulator/MocR family aminotransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9F8_9FIRM
GntR family transcriptional regulator/MocR family aminotransferase {ECO:0000313|EMBL:EGJ48205.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative GntR family transcriptional regulator
L2_041_000G1_scaffold_2014_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10172..10693
DNA (522bp) protein (174aa)
Predicted membrane protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0V7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDB27116.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_041_000G1_scaffold_2014_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10924..11316
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46441.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_2014_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11328..12152
DNA (825bp) protein (275aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Purine nucleoside phosphorylase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEE2_9FIRM
purine nucleoside phosphorylase I
Displaying 14 items

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