ggKbase home page

L2_041_000G1_scaffold_2142

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_2142_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(156..1646)
DNA (1491bp) protein (497aa)
hemD; Uroporphyrinogen-III C-methyltransferase/Uroporphyrinogen-III synthase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAU5_9FIRM
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EGJ47473.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_2142_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1643..2266)
DNA (624bp) protein (208aa)
siroheme synthase, N-terminal domain (EC:1.3.1.76 2.1.1.107 4.99.1.4)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47474.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_2142_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2281..3036)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47475.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ferrichrome ABC transporter (ATP binding subunit) PvuE
L2_041_000G1_scaffold_2142_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3033..4055)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47476.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
iron ABC transporter permease component
L2_041_000G1_scaffold_2142_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4024..4989)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47477.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L2_041_000G1_scaffold_2142_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5122..6060)
DNA (939bp) protein (313aa)
4Fe-4S binding domain protein n=6 Tax=Clostridium difficile RepID=D5Q4V6_CLODI
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFH07012.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
nitrite and sulfite reductase subunit
L2_041_000G1_scaffold_2142_7
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6307..7716
DNA (1410bp) protein (470aa)
MATE efflux family protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AU15_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EMZ27959.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
probable cation efflux pump
L2_041_000G1_scaffold_2142_8
Adlercreutzia equolifaciens, Adlercreutzia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7771..9042)
DNA (1272bp) protein (424aa)
Branched-chain amino acid transporter protein n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6CCU8_9ACTN
branched-chain amino acid transporter protein
Branched-chain amino acid transporter protein {ECO:0000313|EMBL:BAN76989.1}; TaxID=1384484 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Adlercreutzia.;" source="Adlercreutzia equolifaciens DSM 19450.;"
L2_041_000G1_scaffold_2142_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9236..9847
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46715.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_2142_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9922..10854
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46714.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_041_000G1_scaffold_2142_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10908..11921
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46713.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative oxidoreductase
Displaying 11 items

View Taxonomy