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L2_041_000G1_scaffold_1001

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1001_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..192
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NS00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01038.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_041_000G1_scaffold_1001_2
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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182..1357
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LLD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59378.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L2_041_000G1_scaffold_1001_3
unknown

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2274..2840
DNA (567bp) protein (189aa)

This feature has no annotations

L2_041_000G1_scaffold_1001_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3303..7181)
DNA (3879bp) protein (1293aa)
Uncharacterized protein n=3 Tax=Oscillibacter RepID=U2QD70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63312.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_041_000G1_scaffold_1001_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7162..9669)
DNA (2508bp) protein (836aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QW71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63213.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
RND family transporter
L2_041_000G1_scaffold_1001_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9975..10580
DNA (606bp) protein (202aa)
Putative dihydroxyacetone kinase regulator n=2 Tax=Oscillibacter RepID=U2QJY2_9FIRM
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:ERK63215.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_041_000G1_scaffold_1001_7
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10703..11539
DNA (837bp) protein (279aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TKG7_9FIRM
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CDC70204.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
glycosyl transferase family protein
L2_041_000G1_scaffold_1001_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11618..12523
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3K6_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDS74240.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transcriptional regulator, LysR family
L2_041_000G1_scaffold_1001_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12575..14512
DNA (1938bp) protein (646aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B49610
nucleoside-binding protein
Nucleoside-binding protein {ECO:0000313|EMBL:CBL23810.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_041_000G1_scaffold_1001_10
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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14561..15151
DNA (591bp) protein (197aa)
metallophosphoesterase n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B4211B
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:CDD06760.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L2_041_000G1_scaffold_1001_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15232..16728)
DNA (1497bp) protein (499aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBL4_9FIRM
L2_041_000G1_scaffold_1001_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16731..17723)
DNA (993bp) protein (331aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBL5_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EGJ47743.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1001_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17761..19125)
DNA (1365bp) protein (455aa)
Galactokinase (EC:2.7.1.6)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73024.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L2_041_000G1_scaffold_1001_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19270..20925)
DNA (1656bp) protein (552aa)
Methyl-galactoside transport system permease n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB19_9FIRM
Methyl-galactoside transport system permease {ECO:0000313|EMBL:EGJ47547.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_041_000G1_scaffold_1001_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20941..22449)
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
Methyl-galactoside transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XB20_9FIRM
Methyl-galactoside transport system ATP-binding protein {ECO:0000313|EMBL:EGJ47548.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1001_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22654..22986)
DNA (333bp) protein (111aa)
Galactose/glucose-binding lipoprotein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EU52_9FIRM
Galactose/glucose-binding lipoprotein {ECO:0000313|EMBL:EEQ61546.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Displaying 16 items

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