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L2_041_000G1_scaffold_1378

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1378_1
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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397..873
DNA (477bp) protein (159aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8J4_9CLOT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EGD49792.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
sigma-70 family RNA polymerase sigma factor
L2_041_000G1_scaffold_1378_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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877..2361
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X992_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48061.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1378_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3239..5206)
DNA (1968bp) protein (656aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA86_9FIRM
L2_041_000G1_scaffold_1378_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5238..6095)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47265.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1378_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6368..6682)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47266.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1378_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6723..7814)
DNA (1092bp) protein (364aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA89_9FIRM
hypothetical protein
L2_041_000G1_scaffold_1378_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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8094..10220
DNA (2127bp) protein (709aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA90_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EGJ47268.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1378_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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10488..11012
DNA (525bp) protein (175aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA91_9FIRM
anaerobic ribonucleoside-triphosphate reductase activating protein
L2_041_000G1_scaffold_1378_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11042..12421)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46951.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
amino acid carrier protein
L2_041_000G1_scaffold_1378_10
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12518..13168)
DNA (651bp) protein (217aa)
PF06570 family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H7E9_9CLOT
PF06570 family protein {ECO:0000313|EMBL:EJF41535.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_041_000G1_scaffold_1378_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13161..13502)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00038065FD
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EJF41511.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
transcriptional regulator PadR family
L2_041_000G1_scaffold_1378_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13683..15194)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27292.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
carbon starvation protein
L2_041_000G1_scaffold_1378_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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15734..17752
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46871.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sulfatase
Displaying 13 items

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