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L2_041_000G1_scaffold_1397

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1397_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..375)
DNA (375bp) protein (125aa)
ATP-dependent DNA helicase RecG n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD36_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EGJ46732.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
transcriptional regulator
L2_041_000G1_scaffold_1397_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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564..1901
DNA (1338bp) protein (446aa)
cca; tRNA nucleotidyltransferase (EC:2.7.7.-)
tRNA nucleotidyltransferase (CCA-adding enzyme) n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD02_9FIRM
tRNA nucleotidyltransferase (CCA-adding enzyme) {ECO:0000313|EMBL:EGJ46698.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1397_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1882..2238)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45446.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Smr domain-containing protein
L2_041_000G1_scaffold_1397_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2235..2786)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45447.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_1397_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2803..4368)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45448.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
exoenzyme regulatory protein AepA
L2_041_000G1_scaffold_1397_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4548..5987)
DNA (1440bp) protein (480aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pyk; pyruvate kinase Pyk (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHH4_9FIRM
L2_041_000G1_scaffold_1397_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6167..7348)
DNA (1182bp) protein (394aa)
Aspartate transaminase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHH5_9FIRM
Aspartate aminotransferase {ECO:0000313|EMBL:EGJ45461.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1397_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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7726..8496
DNA (771bp) protein (257aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45462.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1397_9
unknown

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comp(8589..9599)
DNA (1011bp) protein (337aa)

This feature has no annotations

L2_041_000G1_scaffold_1397_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9707..10867)
DNA (1161bp) protein (387aa)
Cell division protein FtsZ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDA2_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ftsZ; cell division protein FtsZ
L2_041_000G1_scaffold_1397_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11121..12020)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46797.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_041_000G1_scaffold_1397_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12068..13321)
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDA0_9FIRM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L2_041_000G1_scaffold_1397_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13442..14563)
DNA (1122bp) protein (374aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD99_9FIRM
L2_041_000G1_scaffold_1397_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14815..16011)
DNA (1197bp) protein (399aa)
Cell division protein FtsW n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD98_9FIRM
Cell division protein FtsW {ECO:0000313|EMBL:EGJ46794.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoVE; putative stage V sporulation protein E
L2_041_000G1_scaffold_1397_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16190..17179)
DNA (990bp) protein (330aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD97_9FIRM
L2_041_000G1_scaffold_1397_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17244..17606)
DNA (363bp) protein (121aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD96_9FIRM
murE; udp-n-acetylmuramoylalanyl-d-glutamate--2,6-diaminopimelate ligase
Displaying 16 items

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