ggKbase home page

L2_041_000G1_scaffold_1438

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1438_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..2204)
-----------------
DNA (2202bp)
protein (734aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00468.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
TRSE protein
L2_041_000G1_scaffold_1438_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2197..2550)
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00467.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_041_000G1_scaffold_1438_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2557..3558)
-----------------
DNA (1002bp)
protein (334aa)
Toprim domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU78_9FIRM
Toprim domain protein {ECO:0000313|EMBL:EDN00425.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_041_000G1_scaffold_1438_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3686..4120)
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00424.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_041_000G1_scaffold_1438_5
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4582..5064)
-----------------
DNA (483bp)
protein (161aa)
Uncharacterized protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X6C5_9NOST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ28215.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
L2_041_000G1_scaffold_1438_6
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5057..6358)
-----------------
DNA (1302bp)
protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SAJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42092.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
putative ATPase
L2_041_000G1_scaffold_1438_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6515..7405)
-----------------
DNA (891bp)
protein (297aa)
Resolvase, N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2A2_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDM97489.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
recombinase
L2_041_000G1_scaffold_1438_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7439..7933)
-----------------
DNA (495bp)
protein (165aa)
Recombinase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2A3_9FIRM
Recombinase {ECO:0000313|EMBL:EDM97490.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_041_000G1_scaffold_1438_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9081..10094
-----------------
DNA (1014bp)
protein (338aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pfkA; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDX5_9FIRM
L2_041_000G1_scaffold_1438_10
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10164..10421
-----------------
DNA (258bp)
protein (86aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GUR1_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDE30811.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
GNAT family acetyltransferase
L2_041_000G1_scaffold_1438_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(10465..11850)
-----------------
DNA (1386bp)
protein (462aa)
gltD; glutamate synthase (NADPH/NADH) small chain (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEQ6_9FIRM
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ESL13666.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L2_041_000G1_scaffold_1438_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(11843..12700)
-----------------
DNA (858bp)
protein (286aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZGX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13665.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_041_000G1_scaffold_1438_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12825..14738)
-----------------
DNA (1914bp)
protein (638aa)
5'-nucleotidase (EC:3.1.3.5)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48210.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1438_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14890..15660)
-----------------
DNA (771bp)
protein (257aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC84_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative RNA polymerase sigma factor
L2_041_000G1_scaffold_1438_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15872..17023)
-----------------
DNA (1152bp)
protein (384aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5RVL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQN60560.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
Displaying 15 items

View Taxonomy