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L2_041_000G1_scaffold_1523

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1523_1
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(398..610)
DNA (213bp) protein (71aa)
Predicted transcriptional regulator n=3 Tax=Clostridiales RepID=D4MSM9_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL36765.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L2_041_000G1_scaffold_1523_2
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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711..1163
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M4T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA76368.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L2_041_000G1_scaffold_1523_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1209..2390)
DNA (1182bp) protein (394aa)
Stage II sporulation protein P n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XG21_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:EGJ45702.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
spoIIP; stage II sporulation protein P
L2_041_000G1_scaffold_1523_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2553..4157)
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XFZ7_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
prfC; Peptide chain release factor 3
L2_041_000G1_scaffold_1523_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4500..5024
DNA (525bp) protein (175aa)
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035C30E3
DNA-binding domain methylated-DNA-[protein]-cysteine S-methyltransferase family protein {ECO:0000313|EMBL:CDC50557.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L2_041_000G1_scaffold_1523_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5106..5852)
DNA (747bp) protein (249aa)
Carboxymuconolactone decarboxylase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXX1_9CLOT
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EHI97638.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
carboxymuconolactone decarboxylase
L2_041_000G1_scaffold_1523_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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6127..8472
DNA (2346bp) protein (782aa)
protein serine/threonine phosphatase (EC:3.1.3.16)
Stage II sporulation protein E n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE45_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:EGJ46345.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1523_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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8927..10321
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE38_9FIRM
L2_041_000G1_scaffold_1523_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10473..11675)
DNA (1203bp) protein (401aa)
Sodium/glutamate symporter n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCV0_9FIRM
Sodium/glutamate symporter {ECO:0000313|EMBL:EGJ46646.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sodium--glutamate symport carrier (gltS)
L2_041_000G1_scaffold_1523_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12164..13000)
DNA (837bp) protein (279aa)
Two-component system, response regulator YcbB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCU9_9FIRM
Two-component system, response regulator YcbB {ECO:0000313|EMBL:EGJ46645.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
FOG: CheY-like receiver
L2_041_000G1_scaffold_1523_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12997..14328)
DNA (1332bp) protein (444aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCU8_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L2_041_000G1_scaffold_1523_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14472..14759)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45627.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1523_13
unknown

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14887..14988
DNA (102bp) protein (34aa)

This feature has no annotations

L2_041_000G1_scaffold_1523_14
Listeriaceae bacterium FSL A5-0209, Bacillales, Bacilli, Firmicutes, Bacteria

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15178..16176
DNA (999bp) protein (333aa)
Integrase core domain protein n=2 Tax=Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) RepID=C9LX34_SELS3
Transposase {ECO:0000313|EMBL:KGL46755.1}; TaxID=1497679 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae.;" source="Listeriaceae bacterium FSL A5-0209.;"
Integrase catalytic region
Displaying 14 items

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