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L2_041_000G1_scaffold_1543

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1543_1
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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206..814
DNA (609bp) protein (203aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YCV6_9FIRM
L2_041_000G1_scaffold_1543_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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811..1179
DNA (369bp) protein (123aa)
Endonuclease n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAJ3_9FIRM
UPF0102 protein N510_02418 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_041_000G1_scaffold_1543_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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1320..2825
DNA (1506bp) protein (502aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ2_9FIRM
Threonine synthase {ECO:0000313|EMBL:EGJ47780.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1543_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2839..3528
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47781.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_041_000G1_scaffold_1543_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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3666..5105
DNA (1440bp) protein (480aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Trigger factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ4_9FIRM
tig; trigger factor
L2_041_000G1_scaffold_1543_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5260..5841
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ5_9FIRM
L2_041_000G1_scaffold_1543_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5905..7221
DNA (1317bp) protein (439aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ6_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L2_041_000G1_scaffold_1543_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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7364..9787
DNA (2424bp) protein (808aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ7_9FIRM
L2_041_000G1_scaffold_1543_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9798..10394
DNA (597bp) protein (199aa)
GTPase (EC:3.6.1.-)
Probable GTP-binding protein EngB n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBQ8_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1543_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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10628..11806
DNA (1179bp) protein (393aa)
Malic enzyme (EC:1.1.1.38)
Malate dehydrogenase (Oxaloacetate-decarboxylating) n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC50_9FIRM
Malate dehydrogenase (Oxaloacetate-decarboxylating) {ECO:0000313|EMBL:EGJ48084.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_041_000G1_scaffold_1543_11
unknown

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12081..12299
DNA (219bp) protein (73aa)

This feature has no annotations

L2_041_000G1_scaffold_1543_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12439..13077
DNA (639bp) protein (213aa)
Chloramphenicol O-acetyltransferase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5R1_9FIRM
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EFW06562.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
chloramphenicol o-acetyltransferase
L2_041_000G1_scaffold_1543_13
unknown

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13117..13506
DNA (390bp) protein (130aa)

This feature has no annotations

L2_041_000G1_scaffold_1543_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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14305..15156
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48082.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L2_041_000G1_scaffold_1543_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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15358..16107
DNA (750bp) protein (250aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC47_9FIRM
Displaying 15 items

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