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L2_041_000G1_scaffold_1562

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1562_1
Lysinibacillus fusiformis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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188..799
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Lysinibacillus fusiformis ZB2 RepID=K9ALG6_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EFI68672.1}; TaxID=714961 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus fusiformis ZC1.;"
hypothetical protein
L2_041_000G1_scaffold_1562_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1000..1383)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48207.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted thioesterase
L2_041_000G1_scaffold_1562_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1415..2359)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48208.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
yijE_1; putative inner membrane transporter yiJE
L2_041_000G1_scaffold_1562_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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2538..3371
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47101.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rRNA methylases
L2_041_000G1_scaffold_1562_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(3407..5617)
DNA (2211bp) protein (737aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XT19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12819.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ATP-dependent RNA helicase, superfamily II
L2_041_000G1_scaffold_1562_6
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5719..7362)
DNA (1644bp) protein (548aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium sp. CAG:127 RepID=R5PA21_9CLOT
L2_041_000G1_scaffold_1562_7
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7435..7692)
DNA (258bp) protein (86aa)
ptsH1; Phosphocarrier protein HPr (EC:2.7.11.-)
Phosphocarrier HPr family n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JEW7_9CLOT
Phosphocarrier HPr family {ECO:0000313|EMBL:CDB61313.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L2_041_000G1_scaffold_1562_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7742..9391)
DNA (1650bp) protein (550aa)
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EDN01153.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EDN01153.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
treC; alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha,alpha-phosphotrehalase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSB5_9FIRM
L2_041_000G1_scaffold_1562_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9407..10105)
DNA (699bp) protein (233aa)
PTS system trehalose-specific IIBC component {ECO:0000313|EMBL:EDN01152.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDN01152.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
PTS system trehalose-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system trehalose-specific IIBC component n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSB4_9FIRM
L2_041_000G1_scaffold_1562_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10133..11368)
DNA (1236bp) protein (412aa)
PTS system trehalose-specific IIBC component {ECO:0000313|EMBL:EDN01152.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDN01152.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
PTS system trehalose-specific transporter subunit IIBC (EC:2.7.1.69)
PTS system trehalose-specific IIBC component n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSB4_9FIRM
L2_041_000G1_scaffold_1562_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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11613..12356
DNA (744bp) protein (248aa)
Putative trehalose operon repressor n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSB2_9FIRM
Putative trehalose operon repressor {ECO:0000313|EMBL:EDN01150.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
transcriptional regulator, GntR family
L2_041_000G1_scaffold_1562_12
unknown

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comp(12242..12529)
DNA (288bp) protein (96aa)

This feature has no annotations

L2_041_000G1_scaffold_1562_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12888..13559)
DNA (672bp) protein (224aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCF8_9FIRM
L2_041_000G1_scaffold_1562_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13653..13886)
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCF9_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
acp; acyl carrier protein
L2_041_000G1_scaffold_1562_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13989..15035)
DNA (1047bp) protein (349aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
plsX; acyl-ACP--phosphate acyltransferase (EC:2.3.1.-)
Phosphate acyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCG0_9FIRM
L2_041_000G1_scaffold_1562_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(15037..15288)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15472.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
XRE family transcriptional regulator
L2_041_000G1_scaffold_1562_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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15363..15590
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15398.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Displaying 17 items

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