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L2_041_000G1_scaffold_1662

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1662_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..610
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P880_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHE99966.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
lantibiotic ABC transporter permease
L2_041_000G1_scaffold_1662_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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666..1079
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YG31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ07174.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L2_041_000G1_scaffold_1662_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1222..1638
DNA (417bp) protein (139aa)
Transcriptional regulatory protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BID2_9CLOT
Transcriptional regulatory protein {ECO:0000313|EMBL:ERI77874.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
two-component response regulator
L2_041_000G1_scaffold_1662_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2465..2974
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31478.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_041_000G1_scaffold_1662_5
unknown

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comp(2945..3064)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_041_000G1_scaffold_1662_6
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3520..3897
DNA (378bp) protein (126aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
mRNA interferase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC01_9CLOT
Growth inhibitor
L2_041_000G1_scaffold_1662_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3890..4132
DNA (243bp) protein (81aa)
DNA binding domain, excisionase family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC02_9CLOT
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEG31063.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
DNA binding domain, excisionase family
L2_041_000G1_scaffold_1662_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4280..5566
DNA (1287bp) protein (429aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC03_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEG31064.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Site-specific recombinase XerD
L2_041_000G1_scaffold_1662_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6268..7716)
DNA (1449bp) protein (483aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=T5S069_9FIRM
L2_041_000G1_scaffold_1662_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7900..8517
DNA (618bp) protein (206aa)
Putative rubrerythrin n=3 Tax=Clostridiales RepID=G9YRB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33621.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Rubrerythrin
L2_041_000G1_scaffold_1662_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8592..9518)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46751.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
esterase/lipase
L2_041_000G1_scaffold_1662_12
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(9601..9771)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YG75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15348.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
4Fe-4S binding domain.
L2_041_000G1_scaffold_1662_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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9964..12411
DNA (2448bp) protein (816aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD73_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:EGJ46769.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ATPase
L2_041_000G1_scaffold_1662_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12563..13285
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46770.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
channel protein, hemolysin III family
L2_041_000G1_scaffold_1662_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13337..14722)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46771.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
Displaying 15 items

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