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L2_041_000G1_scaffold_1948

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_000G1_scaffold_1948_1
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(297..980)
DNA (684bp) protein (228aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
Glucosamine-6-phosphate deaminase n=2 Tax=Thermoanaerobacter RepID=NAGB_THEP3
nagB; glucosamine-6-phosphate deaminase
L2_041_000G1_scaffold_1948_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1102..1644)
DNA (543bp) protein (181aa)
Regulatory protein TetR n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYP4_9CLOT
Regulatory protein TetR {ECO:0000313|EMBL:EHI96810.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
transcriptional regulator, TetR family
L2_041_000G1_scaffold_1948_3
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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1855..2274
DNA (420bp) protein (140aa)
PTS system fructose IIA component n=3 Tax=Anaerostipes RepID=B0MIL6_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:EDR96140.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
PTS system fructose IIA component
L2_041_000G1_scaffold_1948_4
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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2326..2826
DNA (501bp) protein (167aa)
PTS system sorbose subfamily IIB component n=3 Tax=Anaerostipes RepID=B0MIL2_9FIRM
PTS system sorbose subfamily IIB protein {ECO:0000313|EMBL:EFV23531.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
PTS system transporter subunit IIB
L2_041_000G1_scaffold_1948_5
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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2860..3675
DNA (816bp) protein (272aa)
PTS system sorbose-specific iic component n=2 Tax=Anaerostipes RepID=B0MIL1_9FIRM
PTS system sorbose-specific iic component {ECO:0000313|EMBL:CDC33840.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
PTS system transporter subunit IIC
L2_041_000G1_scaffold_1948_6
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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3696..4529
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose family IID protein n=3 Tax=Anaerostipes RepID=E5VRP7_9FIRM
PTS system mannose/fructose/sorbose family IID protein {ECO:0000313|EMBL:EFV23529.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L2_041_000G1_scaffold_1948_7
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4595..5548
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R915_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP11896.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
L2_041_000G1_scaffold_1948_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5545..5856
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79333.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HcaD; NAD-dependent dehydrogenase
L2_041_000G1_scaffold_1948_9
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5860..7440
DNA (1581bp) protein (527aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZYT7_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDA41544.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
Thioredoxin reductase
L2_041_000G1_scaffold_1948_10
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7440..7766
DNA (327bp) protein (109aa)
BFD domain protein (2Fe-2S)-binding domain protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JH59_9FIRM
BFD domain protein (2Fe-2S)-binding domain protein {ECO:0000313|EMBL:CCY53913.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
ooxA2; opine oxidase subunit A
L2_041_000G1_scaffold_1948_11
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7759..8895
DNA (1137bp) protein (379aa)
FAD dependent oxidoreductase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JSU1_DESFR
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFL52574.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Glycine/D-amino acid oxidases (deaminating)
L2_041_000G1_scaffold_1948_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8900..9601
DNA (702bp) protein (234aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENJ5_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EEQ59725.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
HAD-superfamily hydrolase
L2_041_000G1_scaffold_1948_13
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9613..9876
DNA (264bp) protein (88aa)
HPr family phosphocarrier n=1 Tax=Clostridium sp. ASF502 RepID=N1ZW26_9CLOT
HPr family phosphocarrier {ECO:0000313|EMBL:EMZ20101.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
phosphotransferase system, phosphocarrier protein HPr
L2_041_000G1_scaffold_1948_14
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9890..11617
DNA (1728bp) protein (576aa)
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC; 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 /; 104-1A) (Bacillus acidocaldarius).;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WQW0_ALIAD
L2_041_000G1_scaffold_1948_15
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11847..12215
DNA (369bp) protein (123aa)
manA; mannose-6-phosphate isomerase ManA (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2WD74_9FIRM
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:ERL22646.1}; TaxID=1321782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0263.;"
L2_041_000G1_scaffold_1948_16
unknown

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12541..13056
DNA (516bp) protein (172aa)

This feature has no annotations

Displaying 16 items

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