ggKbase home page

L2_041_071G1_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_071G1_scaffold_86_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90..692)
DNA (603bp) protein (201aa)
Glycosyl transferase n=3 Tax=Clostridium butyricum RepID=B1QS55_CLOBU
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:KJZ86347.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
family 2 glycosyl transferase
L2_041_071G1_scaffold_86_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(707..1615)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN65_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34194.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
exopolysaccharide biosynthesis protein
L2_041_071G1_scaffold_86_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2087..2791
DNA (705bp) protein (235aa)
Regulatory protein VanR n=4 Tax=Clostridium butyricum RepID=B1QS53_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96032.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
two component transcriptional regulator
L2_041_071G1_scaffold_86_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2766..5093
DNA (2328bp) protein (776aa)
Two-component sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=B1QS52_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86382.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
sensor histidine kinase
L2_041_071G1_scaffold_86_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5303..5647
DNA (345bp) protein (115aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QS51_CLOBU
No significant y {ECO:0000313|EMBL:KJZ86458.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_071G1_scaffold_86_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5763..6929
DNA (1167bp) protein (389aa)
Lysophospholipase L2 {ECO:0000313|EMBL:KJZ93096.1}; EC=3.1.1.5 {ECO:0000313|EMBL:KJZ93096.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
pldB1; lysophospholipase L2 (EC:3.1.1.5)
Lysophospholipase l2 pldb, hydrolase of alpha/beta superfamily n=2 Tax=Clostridium butyricum RepID=B1QS50_CLOBU
L2_041_071G1_scaffold_86_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7164..8384
DNA (1221bp) protein (407aa)
Chloride channel protein EriC n=2 Tax=Clostridium butyricum RepID=M8JLV2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34189.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
chloride ion channel protein
L2_041_071G1_scaffold_86_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8636..12322
DNA (3687bp) protein (1229aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACW4_CLOBU
endo-1,4-beta-galactosidase
L2_041_071G1_scaffold_86_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12519..12983
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQ57_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86450.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_071G1_scaffold_86_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13141..13374)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z2U2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86339.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_071G1_scaffold_86_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13783..14229
DNA (447bp) protein (149aa)
Heat shock protein, molecular chaperone n=4 Tax=Clostridium butyricum RepID=B1QS45_CLOBU
Heat shock protein, molecular chaperone {ECO:0000313|EMBL:KJZ86400.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hsp; 18 kDa heat shock protein Hsp
L2_041_071G1_scaffold_86_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14464..15201
DNA (738bp) protein (246aa)
Tetratricopeptide repeat domain protein n=3 Tax=Clostridium butyricum RepID=B1QS44_CLOBU
GTP cyclohydrolase III (Methanopterin) {ECO:0000313|EMBL:KJZ86381.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_071G1_scaffold_86_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15487..16167
DNA (681bp) protein (227aa)
UPI0003D6253C related cluster n=1 Tax=unknown RepID=UPI0003D6253C
Uncharacterized protein {ECO:0000313|EMBL:KJZ86385.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_071G1_scaffold_86_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16489..17520
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AQ42_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34182.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_071G1_scaffold_86_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17630..18523)
DNA (894bp) protein (298aa)
UPI0003D6842A related cluster n=1 Tax=unknown RepID=UPI0003D6842A
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ETI88613.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
transcriptional regulator, LysR family
L2_041_071G1_scaffold_86_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18910..19995
DNA (1086bp) protein (362aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJZ86365.1}; EC=1.2.1.11 {ECO:0000313|EMBL:KJZ86365.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
asd2; aspartate-semialdehyde dehydrogenase Asd (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Clostridium butyricum RepID=M8KEX6_CLOBU
L2_041_071G1_scaffold_86_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20209..20691
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K6L9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34179.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_071G1_scaffold_86_18
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21092..21262
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JK13_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93070.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L2_041_071G1_scaffold_86_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22009..23298
DNA (1290bp) protein (430aa)
Aspartyl-tRNA synthetase/Aspartyl-tRNA(Asn) synthetase {ECO:0000313|EMBL:KJZ86359.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KJZ86359.1};; EC=6.1.1.23 {ECO:0000313|EMBL:KJZ86359.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aspS2; aspartate--tRNA ligase AspS (EC:6.1.1.12)
Aspartyl-tRNA synthetase n=3 Tax=Clostridium butyricum RepID=B1QS37_CLOBU
L2_041_071G1_scaffold_86_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23743..24021
DNA (279bp) protein (93aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=4 Tax=Clostridium butyricum RepID=B1QS36_CLOBU
hypothetical protein
L2_041_071G1_scaffold_86_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24037..25476
DNA (1440bp) protein (480aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Clostridium butyricum RepID=M8KEX8_CLOBU
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
L2_041_071G1_scaffold_86_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25489..26928
DNA (1440bp) protein (480aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K6M4_CLOBU
L2_041_071G1_scaffold_86_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26985..27350)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACU2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ95191.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_041_071G1_scaffold_86_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27493..27786)
DNA (294bp) protein (98aa)
Acetolactate synthase small subunit {ECO:0000313|EMBL:KJZ86355.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KJZ86355.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Acetolactate synthase isozyme III small subunit n=4 Tax=Clostridium butyricum RepID=B1QS32_CLOBU
amino acid-binding ACT domain protein
L2_041_071G1_scaffold_86_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27779..29512)
DNA (1734bp) protein (578aa)
ilvB2; acetolactate synthase isozyme 1 large subunit (EC:2.2.1.6)
UPI0003D679FC related cluster n=1 Tax=unknown RepID=UPI0003D679FC
Uncharacterized protein {ECO:0000313|EMBL:KJZ86346.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_041_071G1_scaffold_86_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30203..31216
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=N9Z3G0_CLOBU
Membrane spanning protein {ECO:0000313|EMBL:KJZ86387.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_071G1_scaffold_86_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31292..31879
DNA (588bp) protein (196aa)
Hydrolase, NUDIX family n=2 Tax=Clostridium butyricum RepID=C4ILG3_CLOBU
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEP53044.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
isopentenyldiphosphate isomerase
L2_041_071G1_scaffold_86_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32056..33399
DNA (1344bp) protein (448aa)
UPI0003D5DDC7 related cluster n=1 Tax=unknown RepID=UPI0003D5DDC7
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ86374.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mate efflux family protein
L2_041_071G1_scaffold_86_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33576..34640
DNA (1065bp) protein (355aa)
UPI0003D5AD18 related cluster n=1 Tax=unknown RepID=UPI0003D5AD18
Uncharacterized protein {ECO:0000313|EMBL:KJZ95204.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_041_071G1_scaffold_86_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34897..35376
DNA (480bp) protein (160aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1R0G5_CLOBU
Putative membrane protein {ECO:0000313|EMBL:KJZ86422.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative membrane protein
Displaying items 1-30 of 47 in total

View Taxonomy