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L2_041_124G1_scaffold_9

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Displaying items 1-30 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_9_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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417..506
DNA (90bp) protein (30aa)
Uncharacterized protein n=97 Tax=Escherichia coli RepID=H1BUK7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELE53673.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L2_041_124G1_scaffold_9_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(503..688)
DNA (186bp) protein (62aa)
Carbon storage regulator homolog n=2139 Tax=Bacteria RepID=CSRA_CITK8
csrA; carbon storage regulator
Carbon storage regulator {ECO:0000256|HAMAP-Rule:MF_00167}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L2_041_124G1_scaffold_9_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(923..3553)
DNA (2631bp) protein (877aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=24 Tax=Escherichia coli RepID=SYA_ECOSM
L2_041_124G1_scaffold_9_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3682..4182)
DNA (501bp) protein (167aa)
Regulatory protein RecX n=24 Tax=Escherichia coli RepID=E9UHQ2_ECOLX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
recX; recombination regulator RecX
L2_041_124G1_scaffold_9_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4251..5312)
DNA (1062bp) protein (354aa)
Protein RecA n=1481 Tax=Proteobacteria RepID=RECA_ECO24
recA; recombinase A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L2_041_124G1_scaffold_9_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5392..5889)
DNA (498bp) protein (166aa)
Uncharacterized protein n=61 Tax=Escherichia coli RepID=B7NSI0_ECO7I
ygaD; hypothetical protein
Conserved protein {ECO:0000313|EMBL:AEQ13860.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
L2_041_124G1_scaffold_9_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6034..7119)
DNA (1086bp) protein (362aa)
Lytic murein transglycosylase B {ECO:0000313|EMBL:EHU07526.1}; EC=2.4.-.- {ECO:0000313|EMBL:EHU07526.1};; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
Lytic murein transglycosylase B n=2 Tax=Escherichia coli RepID=E5ZNU6_ECOLX
mltB; murein hydrolase B
L2_041_124G1_scaffold_9_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7376..7939
DNA (564bp) protein (188aa)
Glucitol/sorbitol permease IIC component n=742 Tax=Enterobacteriaceae RepID=PTHC_ECOLI
srlA; Glucitol/sorbitol permease IIC component
Glucitol/sorbitol permease IIC component {ECO:0000313|EMBL:KEO22752.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L2_041_124G1_scaffold_9_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7936..8895
DNA (960bp) protein (320aa)
srlE; PTS system glucitol/sorbitol-specific transporter subunit IIB (EC:2.7.1.69)
PTS system glucitol/sorbitol-specific, EIIB component {ECO:0000313|EMBL:EFJ96952.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFJ96952.1};; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
Glucitol/sorbitol-specific phosphotransferase enzyme IIB component n=12 Tax=Escherichia coli RepID=L3B3T1_ECOLX
L2_041_124G1_scaffold_9_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8906..9277
DNA (372bp) protein (124aa)
PTS system, glucitol/sorbitol-specific IIA component family protein {ECO:0000313|EMBL:EZJ38083.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EZJ38083.1};; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
Glucitol/sorbitol-specific phosphotransferase enzyme n=202 Tax=Escherichia coli RepID=E2QQF2_ECOLX
glucitol/sorbitol-specific PTS system component IIA
L2_041_124G1_scaffold_9_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9281..10060
DNA (780bp) protein (260aa)
srlD; sorbitol-6-phosphate dehydrogenase (EC:1.1.1.140)
Sorbitol-6-phosphate 2-dehydrogenase {ECO:0000313|EMBL:KEJ56142.1}; EC=1.1.1.140 {ECO:0000313|EMBL:KEJ56142.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Sorbitol-6-phosphate 2-dehydrogenase n=308 Tax=Escherichia RepID=E2QQF3_ECOLX
L2_041_124G1_scaffold_9_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10166..10525
DNA (360bp) protein (120aa)
Glucitol operon activator protein n=297 Tax=Escherichia RepID=E2QQF4_ECOLX
gutM; DNA-binding transcriptional activator GutM
Glucitol operon activator family protein {ECO:0000313|EMBL:EZJ38085.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_041_124G1_scaffold_9_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10592..11365
DNA (774bp) protein (258aa)
Glucitol operon repressor n=381 Tax=Escherichia RepID=E2QQF5_ECOLX
srlR; DNA-binding transcriptional repressor SrlR
Glucitol operon repressor {ECO:0000313|EMBL:EGI14314.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L2_041_124G1_scaffold_9_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11358..12323
DNA (966bp) protein (322aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Arabinose 5-phosphate isomerase n=58 Tax=Escherichia coli RepID=E2QQF6_ECOLX
gutQ; Protein gutQ
L2_041_124G1_scaffold_9_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12320..13834)
DNA (1515bp) protein (505aa)
Anaerobic nitric oxide reductase transcription regulator NorR n=29 Tax=Escherichia coli RepID=H8DCX9_ECOLX
anaerobic nitric oxide reductase transcriptional regulator
Anaerobic nitric oxide reductase transcription regulator NorR {ECO:0000256|HAMAP-Rule:MF_01314, ECO:0000256|SAAS:SAAS00009293}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L2_041_124G1_scaffold_9_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14021..15460
DNA (1440bp) protein (480aa)
Anaerobic nitric oxide reductase flavorubredoxin n=22 Tax=Escherichia coli RepID=E2QQF8_ECOLX
anaerobic nitric oxide reductase flavorubredoxin
Anaerobic nitric oxide reductase flavorubredoxin {ECO:0000256|HAMAP-Rule:MF_01312}; Short=FlRd {ECO:0000256|HAMAP-Rule:MF_01312};; Short=FlavoRb {ECO:0000256|HAMAP-Rule:MF_01312};; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L2_041_124G1_scaffold_9_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15457..16590
DNA (1134bp) protein (378aa)
norW; nitric oxide reductase FlRd-NAD(+) reductase (EC:1.18.1.-)
Nitric oxide reductase FlRd-NAD(+) reductase {ECO:0000255|HAMAP-Rule:MF_01313}; EC=1.18.1.- {ECO:0000255|HAMAP-Rule:MF_01313};; Flavorubredoxin reductase {ECO:0000255|HAMAP-Rule:MF_01313}; Short=FlRd-reductase {ECO:0000255|HAMAP-Rule:MF_01313};; Short=FlavoRb reductase {ECO:0000255|HAMAP-Rule:MF_01313};; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
Nitric oxide reductase FlRd-NAD(+) reductase n=119 Tax=Escherichia RepID=NORW_ECO45
L2_041_124G1_scaffold_9_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16814..19066)
DNA (2253bp) protein (751aa)
Carbamoyltransferase hypF n=19 Tax=Escherichia coli RepID=L3B2Z3_ECOLX
Carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases {ECO:0000313|EMBL:CAR04221.1}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
hypF; carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases
L2_041_124G1_scaffold_9_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19219..19746)
DNA (528bp) protein (176aa)
Electron transport protein HydN n=1315 Tax=Enterobacteriaceae RepID=HYDN_ECO57
hydN; electron transporter hydN
Electron transport protein hydN {ECO:0000313|EMBL:KEJ45275.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L2_041_124G1_scaffold_9_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20131..20559
DNA (429bp) protein (143aa)
Uncharacterized protein n=21 Tax=Escherichia coli RepID=L3B245_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU20476.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L2_041_124G1_scaffold_9_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20651..21070)
DNA (420bp) protein (140aa)
Helix-turn-helix family protein n=44 Tax=Escherichia coli RepID=E7JM96_ECOLX
putative HTH-type transcriptional regulator ygjM
Putative HTH-type transcriptional regulator ygjM {ECO:0000313|EMBL:CAR09182.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L2_041_124G1_scaffold_9_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21067..21378)
DNA (312bp) protein (104aa)
mRNA interferase HigB {ECO:0000313|EMBL:EZJ49628.1}; EC=3.1.-.- {ECO:0000313|EMBL:EZJ49628.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Uncharacterized protein n=46 Tax=Enterobacteriaceae RepID=B7MZ11_ECO81
hypothetical protein
L2_041_124G1_scaffold_9_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21541..22314)
DNA (774bp) protein (258aa)
Uncharacterized protein n=34 Tax=Escherichia coli RepID=L3B300_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR09329.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L2_041_124G1_scaffold_9_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22339..22806)
DNA (468bp) protein (156aa)
Hydrogenase maturation peptidase HycI {ECO:0000313|EMBL:EZJ49630.1}; EC=3.4.23.- {ECO:0000313|EMBL:EZJ49630.1};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Protease involved in processing C-terminal end of HycE n=206 Tax=Escherichia coli RepID=B7MZ13_ECO81
hycI; hydrogenase 3 maturation protease
L2_041_124G1_scaffold_9_25
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22799..23209)
DNA (411bp) protein (137aa)
Protein required for maturation of hydrogenase 3 n=371 Tax=Enterobacteriaceae RepID=B7MYM0_ECO81
hycH; HycH protein
Formate hydrogenlyase maturation protein hycH {ECO:0000313|EMBL:EOU48874.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L2_041_124G1_scaffold_9_26
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23206..23973)
DNA (768bp) protein (256aa)
Formate hydrogenlyase subunit 7 n=738 Tax=Enterobacteriaceae RepID=E2QQG8_ECOLX
hycG; formate hydrogenlyase subunit G
Formate hydrogenlyase subunit 7 {ECO:0000313|EMBL:EOU48875.1}; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
L2_041_124G1_scaffold_9_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23973..24515)
DNA (543bp) protein (181aa)
Formate hydrogenlyase complex iron-sulfur protein n=22 Tax=Escherichia coli RepID=L3B1Z8_ECOLX
hycF; Subunit 6 of formate hydrogenlyase
Formate hydrogenlyase subunit {ECO:0000313|EMBL:BAI56053.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L2_041_124G1_scaffold_9_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24525..26234)
DNA (1710bp) protein (570aa)
Formate hydrogenlyase subunit 5 n=21 Tax=Escherichia coli RepID=L3B305_ECOLX
Respiratory-chain NADH dehydrogenase, 30 Kd subunit {ECO:0000313|EMBL:KDY52419.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
formate hydrogenlyase subunit 5
L2_041_124G1_scaffold_9_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26252..27175)
DNA (924bp) protein (308aa)
Formate hydrogenlyase subunit 4 n=409 Tax=Enterobacteriaceae RepID=E2QQH1_ECOLX
hycD; formate hydrogenlyase subunit 4
Formate hydrogenlyase subunit 4 {ECO:0000313|EMBL:EZJ37752.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L2_041_124G1_scaffold_9_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27178..29004)
DNA (1827bp) protein (609aa)
hycC; NADH dehydrogenase subunit N (EC:1.12.7.2)
Hydrogenase 3, membrane subunit, subunit of hydrogenase 3 and formate hydrogenlyase complex n=15 Tax=Escherichia coli RepID=K0TVS4_ECOLX
Formate hydrogenlyase subunit 3 {ECO:0000313|EMBL:EFJ96996.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
Displaying items 1-30 of 293 in total

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