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L2_041_124G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_68_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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425..709
DNA (285bp) protein (95aa)
10 kDa chaperonin n=10 Tax=Clostridium perfringens RepID=CH10_CLOP1
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_68_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

764..2383
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=8 Tax=Clostridium perfringens RepID=CH60_CLOP1
groEL; molecular chaperone GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
L2_041_124G1_scaffold_68_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3048..3470
DNA (423bp) protein (141aa)
Prepilin peptidase dependent protein A n=1 Tax=Clostridium perfringens F262 RepID=H7CYZ3_CLOPF
Prepilin peptidase dependent protein A {ECO:0000313|EMBL:EIA16059.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
type IV pilin
L2_041_124G1_scaffold_68_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3640..4491
DNA (852bp) protein (284aa)
Type IV leader peptidase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CYZ2_CLOPF
Type IV leader peptidase family protein {ECO:0000313|EMBL:EIA16058.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Type IV leader peptidase
L2_041_124G1_scaffold_68_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4561..6249
DNA (1689bp) protein (563aa)
Secretion system protein E n=5 Tax=Clostridium perfringens RepID=H7CYZ1_CLOPF
Secretion system protein E {ECO:0000313|EMBL:EIA16057.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
secretion system protein E
L2_041_124G1_scaffold_68_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6276..7481
DNA (1206bp) protein (402aa)
Bacterial type II secretion system protein F n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF08_CLOPF
Bacterial type II secretion system protein F {ECO:0000313|EMBL:EDT27381.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
type II secretion system protein F
L2_041_124G1_scaffold_68_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7507..8025
DNA (519bp) protein (173aa)
Putative type IV pilin n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF07_CLOPF
Putative type IV pilin {ECO:0000313|EMBL:EDT27398.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
type IV pilin
L2_041_124G1_scaffold_68_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8078..8551
DNA (474bp) protein (158aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RF06_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT27426.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
type IV pilin
L2_041_124G1_scaffold_68_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8567..9046
DNA (480bp) protein (160aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3E9_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT71687.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_041_124G1_scaffold_68_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9168..10283
DNA (1116bp) protein (372aa)
Type IV pilus assembly protein PilM n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUV8_CLOPF
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EDS78951.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
type IV pilus assembly protein PilM
L2_041_124G1_scaffold_68_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10298..10864
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUV7_CLOPF
hypothetical protein
Type IV pilus biogenesis protein PilN {ECO:0000313|EMBL:ABG87107.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_041_124G1_scaffold_68_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10854..12071
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUV6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS78984.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L2_041_124G1_scaffold_68_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12092..13126
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 PF1_CLOPF">RepID=B1RPF1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86765.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L2_041_124G1_scaffold_68_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13128..15392
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 PF2_CLOPF">RepID=B1RPF2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27416.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_041_124G1_scaffold_68_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15419..15994
DNA (576bp) protein (192aa)
Prepilin peptidase-dependent n=1 Tax=Clostridium perfringens NCTC 8239 PF3_CLOPF">RepID=B1RPF3_CLOPF
Prepilin peptidase-dependent {ECO:0000313|EMBL:EDT27414.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
prepilin peptidase-dependent
L2_041_124G1_scaffold_68_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16081..20097
DNA (4017bp) protein (1339aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REZ8_CLOPF
von Willebrand factor type A domain protein {ECO:0000313|EMBL:EDT27377.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_041_124G1_scaffold_68_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20807..22261
DNA (1455bp) protein (485aa)
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Inosine-5'-monophosphate dehydrogenase n=9 Tax=Clostridium perfringens RepID=H7CYX9_CLOPF
L2_041_124G1_scaffold_68_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22367..23896
DNA (1530bp) protein (510aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
GMP synthase [glutamine-hydrolyzing] n=8 Tax=Clostridium perfringens RepID=GUAA_CLOPE
L2_041_124G1_scaffold_68_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24261..25553)
DNA (1293bp) protein (431aa)
Nitrate extrusion protein n=4 Tax=Clostridium perfringens RepID=H7CYX7_CLOPF
narK; nitrate extrusion protein
Nitrate extrusion protein {ECO:0000313|EMBL:EIA16043.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_68_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26183..27922
DNA (1740bp) protein (580aa)
Oligopeptide ABC transporter n=2 Tax=Clostridium perfringens RepID=Q8XI48_CLOPE
appA; oligopeptide ABC transporter
Oligopeptide ABC transporter {ECO:0000313|EMBL:BAB81979.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_68_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27997..28962
DNA (966bp) protein (322aa)
Oligopeptide/dipeptide ABC transporter, permease protein n=9 Tax=Clostridium perfringens RepID=Q0TN46_CLOP1
appB; oligopeptide ABC transporter
Oligopeptide/dipeptide ABC transporter, permease protein {ECO:0000313|EMBL:EDT15936.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_68_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28977..29891
DNA (915bp) protein (305aa)
Oligopeptide ABC transporter permease component n=10 Tax=Clostridium perfringens RepID=H7CYX4_CLOPF
appC; oligopeptide ABC transporter
Oligopeptide ABC transporter {ECO:0000313|EMBL:BAB81977.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_68_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29905..30882
DNA (978bp) protein (326aa)
Oligopeptide ABC transporter ATPase n=8 Tax=Clostridium perfringens RepID=H7CYX3_CLOPF
oligopeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15977.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_68_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30883..31851
DNA (969bp) protein (323aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=Q0TN49_CLOP1
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide ABC transporter {ECO:0000313|EMBL:BAB81975.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_68_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32053..32262
DNA (210bp) protein (70aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CYX1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27449.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_041_124G1_scaffold_68_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32292..33644
DNA (1353bp) protein (451aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Glucose-6-phosphate isomerase n=7 Tax=Clostridium perfringens RepID=G6PI_CLOP1
L2_041_124G1_scaffold_68_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33842..34291
DNA (450bp) protein (150aa)
UPF0178 protein CPE2266 n=6 Tax=Clostridium perfringens RepID=Y2266_CLOPE
hypothetical protein
UPF0178 protein CPC_2571 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_041_124G1_scaffold_68_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34664..36724
DNA (2061bp) protein (687aa)
Two component regulator three Y motif protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BQS3_CLOPF
Two component regulator three Y motif protein {ECO:0000313|EMBL:EDT16040.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
triple tyrosine motif-containing protein
L2_041_124G1_scaffold_68_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37098..37817
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Pseudouridine synthase n=7 Tax=Clostridium perfringens RepID=H7CYW7_CLOPF
16S pseudouridylate synthase
L2_041_124G1_scaffold_68_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38370..39041
DNA (672bp) protein (224aa)
Gram positive anchor protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3A3_CLOPF
anchor protein
Gram positive anchor protein {ECO:0000313|EMBL:EDT71695.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Displaying items 1-30 of 41 in total

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