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L2_041_124G1_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_74_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..633)
DNA (633bp) protein (211aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
UPI0003D64CB9 related cluster n=1 Tax=unknown RepID=UPI0003D64CB9
DNA topoisomerase IV subunit A
L2_041_124G1_scaffold_74_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(678..2627)
DNA (1950bp) protein (650aa)
gyrB2; DNA gyrase subunit B (EC:5.99.1.3)
UPI0003D5F1BB related cluster n=1 Tax=unknown RepID=UPI0003D5F1BB
DNA topoisomerase ATP-hydrolyzing {ECO:0000313|EMBL:ETI89158.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_041_124G1_scaffold_74_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3204..4592)
DNA (1389bp) protein (463aa)
Glycosyl transferase, family 2 n=2 Tax=Clostridium butyricum RepID=M8KAV9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31510.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glycosyl transferase family protein
L2_041_124G1_scaffold_74_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5155..6501)
DNA (1347bp) protein (449aa)
gluD; glutamate dehydrogenase (EC:1.4.1.2)
UPI0003D5B0C3 related cluster n=1 Tax=unknown RepID=UPI0003D5B0C3
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_041_124G1_scaffold_74_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6680..7315)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AH88_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87570.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_74_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7376..8437)
DNA (1062bp) protein (354aa)
gluP; rhomboid protease GluP (EC:3.4.21.105)
UPI0003D61AEF related cluster n=1 Tax=unknown RepID=UPI0003D61AEF
Rhomboid family protein {ECO:0000313|EMBL:ETI89162.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L2_041_124G1_scaffold_74_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8592..10379)
DNA (1788bp) protein (596aa)
yjbG; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=2 Tax=Clostridium butyricum RepID=B1QXD4_CLOBU
Oligoendopeptidase F {ECO:0000313|EMBL:KJZ87548.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_041_124G1_scaffold_74_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10534..10935)
DNA (402bp) protein (134aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXD5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87574.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_74_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11262..11672
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=M8K2Q5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87594.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_74_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11843..12070)
DNA (228bp) protein (76aa)
D-alanine--poly(phosphoribitol) ligase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00565}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00565};; D-alanyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00565}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
D-alanine--poly(phosphoribitol) ligase, subunit 2 (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 2 n=4 Tax=Clostridium butyricum RepID=B1QXD7_CLOBU
L2_041_124G1_scaffold_74_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12190..13344)
DNA (1155bp) protein (385aa)
UPI00039D4D67 related cluster n=1 Tax=unknown RepID=UPI00039D4D67
Uncharacterized protein {ECO:0000313|EMBL:KJZ97606.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
membrane bound O-acyl transferase, MBOAT family protein
L2_041_124G1_scaffold_74_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13341..14858)
DNA (1518bp) protein (506aa)
D-alanine--poly(phosphoribitol) ligase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00593}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00593};; D-alanine-D-alanyl carrier protein ligase {ECO:0000256|HAMAP-Rule:MF_00593}; D-alanine-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00593}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dltA2; D-alanine--poly(phosphoribitol) ligase subunit 1 (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 1 n=2 Tax=Clostridium butyricum RepID=B1QXD9_CLOBU
L2_041_124G1_scaffold_74_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14982..16163)
DNA (1182bp) protein (394aa)
Putative D-alanine transferase n=2 Tax=Clostridium butyricum RepID=B1QXE0_CLOBU
Poly(Glycerophosphate chain) D-alanine transfer protein DltD {ECO:0000313|EMBL:KJZ87551.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dltD1; D-alanyl-lipoteichoic acid biosynthesis protein DltD
L2_041_124G1_scaffold_74_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16406..17077
DNA (672bp) protein (224aa)
Putative metal ion ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2R1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30983.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metal transport system ATP-binding protein
L2_041_124G1_scaffold_74_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17099..17899
DNA (801bp) protein (267aa)
D-alanine--poly(Phosphoribitol) ligase subunit 2 {ECO:0000313|EMBL:KJZ97655.1}; EC=6.1.1.13 {ECO:0000313|EMBL:KJZ97655.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
High-affinity Zinc uptake system membrane protein ZnuB n=2 Tax=Clostridium butyricum RepID=B1QXE2_CLOBU
ABC-type Mn2+/Zn2+ transport system, permease component
L2_041_124G1_scaffold_74_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17949..18371)
DNA (423bp) protein (141aa)
Transcriptional regulator, Fur family n=4 Tax=Clostridium butyricum RepID=B1QXE3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87544.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Fe2+/Zn2+ uptake regulation protein
L2_041_124G1_scaffold_74_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18432..18983)
DNA (552bp) protein (184aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=M8J751_CLOBU
Integral membrane protein {ECO:0000313|EMBL:KJZ87543.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
membrane protein
L2_041_124G1_scaffold_74_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19365..20579
DNA (1215bp) protein (405aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfp (EC:2.7.1.90)
Phosphofructokinase domain protein n=3 Tax=Clostridium butyricum RepID=B1QXE5_CLOBU
L2_041_124G1_scaffold_74_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20652..21962)
DNA (1311bp) protein (437aa)
csd1; cysteine desulfurase Csd (EC:2.8.1.7)
Aminotransferase n=4 Tax=Clostridium butyricum RepID=B1QXE6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30988.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_124G1_scaffold_74_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22104..22571
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADV6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87599.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_74_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22580..23215
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YU55_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87596.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_74_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23296..23886)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium butyricum DKU-01 RepID=M8J756_CLOBU
TetR family transcriptional regulator {ECO:0000313|EMBL:KHD15886.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
transcriptional regulator
L2_041_124G1_scaffold_74_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24290..26215
DNA (1926bp) protein (642aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium butyricum RepID=B1QXF0_CLOBU
ATPase components of ABC transporter {ECO:0000313|EMBL:KJZ87532.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ydiF4; ABC transporter ATP-binding protein YdiF
L2_041_124G1_scaffold_74_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26341..26778)
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Clostridium butyricum RepID=M8K2S0_CLOBU
L2_041_124G1_scaffold_74_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26986..27531)
DNA (546bp) protein (182aa)
Cna protein B-type domain n=4 Tax=Clostridium butyricum RepID=B1QXF2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87511.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cna B domain protein
L2_041_124G1_scaffold_74_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27633..32909)
DNA (5277bp) protein (1759aa)
Diguanylate cyclase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHH4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97596.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
diguanylate cyclase
L2_041_124G1_scaffold_74_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33093..34355)
DNA (1263bp) protein (421aa)
Uracil-xanthine permease n=2 Tax=Clostridium butyricum RepID=R0A3B3_CLOBU
Uracil-xanthine permease {ECO:0000313|EMBL:ENZ30998.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
uracil permease
L2_041_124G1_scaffold_74_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34634..35362
DNA (729bp) protein (243aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:KJZ87533.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJZ87533.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Polysaccharide deacetylase n=2 Tax=Clostridium butyricum RepID=M8KAY5_CLOBU
polysaccharide deacetylase
L2_041_124G1_scaffold_74_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35438..35983)
DNA (546bp) protein (182aa)
Tryptophan transport protein n=3 Tax=Clostridium butyricum RepID=C4IDV6_CLOBU
Tryptophan transport protein {ECO:0000313|EMBL:EEP55553.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_041_124G1_scaffold_74_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36484..37815)
DNA (1332bp) protein (444aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YTS1_CLOBU
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ31001.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
diguanylate cyclase (GGDEF) domain-containing protein
Displaying items 1-30 of 45 in total

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