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L2_041_124G1_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_90_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..698
DNA (696bp) protein (232aa)
MdsC protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RET6_CLOPF
MdsC protein {ECO:0000313|EMBL:EDT27551.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
MdsC protein
L2_041_124G1_scaffold_90_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

860..2254
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRG1_CLOPF
MATE efflux family protein {ECO:0000313|EMBL:EDT15696.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MATE efflux family protein
L2_041_124G1_scaffold_90_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2356..4701
DNA (2346bp) protein (782aa)
Putative ATP-dependent helicase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSH4_CLOPF
Probable helicase protein {ECO:0000313|EMBL:BAB80903.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
helicase
L2_041_124G1_scaffold_90_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4900..6888
DNA (1989bp) protein (663aa)
UPF0313 protein AC7_1449 n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSH5_CLOPF
UPF0313 protein AC3_1598 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_041_124G1_scaffold_90_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7093..10107
DNA (3015bp) protein (1005aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQN1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAB80901.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein
L2_041_124G1_scaffold_90_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10116..11378
DNA (1263bp) protein (421aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BLU1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS79233.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_041_124G1_scaffold_90_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11625..12302
DNA (678bp) protein (226aa)
DNA-binding response regulator n=9 Tax=Clostridium perfringens RepID=H7CVM8_CLOPF
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT15709.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_90_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12289..13725
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR93_CLOP1
sensor histidine kinase
L2_041_124G1_scaffold_90_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13759..14400)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XL51_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80897.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_90_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14651..16147
DNA (1497bp) protein (499aa)
Amino acid permease family protein n=2 Tax=Clostridium perfringens RepID=Q0TR95_CLOP1
amino acid permease
Inner membrane transporter YjeM {ECO:0000313|EMBL:EIA17343.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_90_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16261..16671
DNA (411bp) protein (137aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=B1BLU7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15645.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_90_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16721..17497
DNA (777bp) protein (259aa)
Putative membrane protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6F7_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT70625.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_041_124G1_scaffold_90_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17544..18806)
DNA (1263bp) protein (421aa)
VanW-related protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSI3_CLOPF
von Willebrand factor A
VanW-related protein {ECO:0000313|EMBL:EDT27511.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_041_124G1_scaffold_90_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19063..20034
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVM1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17339.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_041_124G1_scaffold_90_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20024..20221)
DNA (198bp) protein (66aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CVM0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27609.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_041_124G1_scaffold_90_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20240..20428)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CVL9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17337.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_90_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20675..21406)
DNA (732bp) protein (244aa)
CobB/CobQ family glutamine amidotransferase n=7 Tax=Clostridium perfringens RepID=H7CVL8_CLOPF
CobB/CobQ family glutamine amidotransferase
Probable cobyric acid synthase {ECO:0000313|EMBL:BAB80895.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_90_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21424..21810)
DNA (387bp) protein (129aa)
UDP-N-acetylmuramyl tripeptide synthetase MurC homolog n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRA3_CLOP1
UDP-N-acetylmuramyl tripeptide synthetase MurC-like protein
UDP-N-acetylmuramyl tripeptide synthetase MurC homolog {ECO:0000313|EMBL:EDT24368.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_041_124G1_scaffold_90_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22258..22731)
DNA (474bp) protein (158aa)
Probable UDP-N-acetylmuramyl tripeptide synthetase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XL54_CLOPE
UDP-N-acetylmuramyl tripeptide synthetase MurC-like protein
Probable UDP-N-acetylmuramyl tripeptide synthetase {ECO:0000313|EMBL:BAB80894.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_90_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23030..24007
DNA (978bp) protein (326aa)
Mannose-6-phosphate isomerase, class I n=8 Tax=Clostridium perfringens RepID=H7CVL6_CLOPF
manA; mannose-6-phosphate isomerase
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EIA17334.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_90_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24267..25181
DNA (915bp) protein (305aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=4 Tax=Clostridium perfringens RepID=H7CVL5_CLOPF
L2_041_124G1_scaffold_90_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25391..26491
DNA (1101bp) protein (367aa)
6-phosphofructokinase 2 n=5 Tax=Clostridium perfringens PF2_CLOPE">RepID=K6PF2_CLOPE
pfk; 6-phosphofructokinase
6-phosphofructokinase {ECO:0000313|EMBL:EIA17332.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_90_23
unknown

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26588..26770
DNA (183bp) protein (61aa)

This feature has no annotations

L2_041_124G1_scaffold_90_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26724..27503
DNA (780bp) protein (260aa)
Beta-lactamase n=8 Tax=Clostridium perfringens RepID=H7CVL3_CLOPF
beta-lactamase
Putative beta-lactamase {ECO:0000313|EMBL:EDT15680.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_90_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27915..28838
DNA (924bp) protein (308aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Aspartate carbamoyltransferase n=6 Tax=Clostridium perfringens RepID=PYRB_CLOP1
L2_041_124G1_scaffold_90_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28843..29001
DNA (159bp) protein (53aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CVL1_CLOPF
hypothetical protein
Aspartate carbamoyltransferase regulatory chain {ECO:0000313|EMBL:EDT15713.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_90_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29023..30222
DNA (1200bp) protein (400aa)
pyrC; dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Dihydroorotase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STN5_CLOPS
L2_041_124G1_scaffold_90_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30232..31095
DNA (864bp) protein (288aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=4 Tax=Clostridium perfringens RepID=B1BLS5_CLOPF
L2_041_124G1_scaffold_90_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31120..31860
DNA (741bp) protein (247aa)
pyrK; dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRD7_CLOPF
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_90_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31879..32778
DNA (900bp) protein (300aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Dihydroorotate dehydrogenase n=1 Tax=Clostridium perfringens F262 RepID=H7CVK7_CLOPF
pyrD; dihydroorotate dehydrogenase 1B
Displaying items 1-30 of 43 in total

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