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L2_041_124G1_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_127_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..298
DNA (297bp) protein (99aa)
Diacylglycerol kinase catalytic domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STA9_CLOPS
putative lipid kinase
Uncharacterized protein {ECO:0000313|EMBL:EDT25545.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_041_124G1_scaffold_127_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

371..1051
DNA (681bp) protein (227aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQW3_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT13403.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_127_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1223..1915)
DNA (693bp) protein (231aa)
Amino acid ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBX2_CLOPF
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT22258.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
amino acid ABC transporter ATP-binding protein
L2_041_124G1_scaffold_127_4
unknown

Not on your lists

2306..2563
DNA (258bp) protein (86aa)

This feature has no annotations

L2_041_124G1_scaffold_127_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2582..3370)
DNA (789bp) protein (263aa)
Amino acid ABC transporter (Binding protein) n=1 Tax=Clostridium perfringens F262 RepID=H7CW04_CLOPF
Amino acid ABC transporter (Binding protein) {ECO:0000313|EMBL:EIA17229.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
amino acid ABC transporter (binding protein)
L2_041_124G1_scaffold_127_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3718..4989
DNA (1272bp) protein (424aa)
CBS domain-containing protein n=4 Tax=Clostridium perfringens RepID=H7CW03_CLOPF
hypothetical protein
CBS domain-containing protein {ECO:0000313|EMBL:EIA17228.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_127_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5328..6230
DNA (903bp) protein (301aa)
cysK; cysteine synthase A (EC:2.5.1.47)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Cysteine synthase A n=4 Tax=Clostridium perfringens RepID=B1BX71_CLOPF
L2_041_124G1_scaffold_127_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6249..6758
DNA (510bp) protein (170aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Serine acetyltransferase n=7 Tax=Clostridium perfringens RepID=H7CW01_CLOPF
L2_041_124G1_scaffold_127_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6904..7896
DNA (993bp) protein (331aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XKS4_CLOPE
iron-sulfur cluster-binding protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81026.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_127_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7934..8638
DNA (705bp) protein (235aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase family protein n=3 Tax=Clostridium perfringens RepID=H7CVZ9_CLOPF
plsD; sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase family protein {ECO:0000313|EMBL:EIA17224.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_127_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8650..9279
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Endonuclease III n=7 Tax=Clostridium perfringens RepID=H7CVZ8_CLOPF
endonuclease III
L2_041_124G1_scaffold_127_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9308..10171)
DNA (864bp) protein (288aa)
Putative membrane protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTD9_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT25642.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_041_124G1_scaffold_127_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10271..12736
DNA (2466bp) protein (822aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Sensory box histidine kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V6A0_CLOPF
two-component sensor histidine kinase
L2_041_124G1_scaffold_127_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12856..13761
DNA (906bp) protein (302aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=5 Tax=Clostridium perfringens RepID=B1BX78_CLOPF
L2_041_124G1_scaffold_127_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13835..14800
DNA (966bp) protein (322aa)
Muramidase n=7 Tax=Clostridium perfringens RepID=I1SBA5_CLOPE
muramidase
Muramidase {ECO:0000313|EMBL:BAB81020.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_127_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14965..16527
DNA (1563bp) protein (521aa)
VanW-like family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBD8_CLOPF
VanW-like family protein {ECO:0000313|EMBL:EDT22457.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
von Willebrand factor A
L2_041_124G1_scaffold_127_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16685..17518
DNA (834bp) protein (278aa)
HAD family hydrolase n=1 Tax=Clostridium perfringens F262 RepID=H7CVZ2_CLOPF
HAD family hydrolase {ECO:0000313|EMBL:EIA17217.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
HAD family hydrolase
L2_041_124G1_scaffold_127_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17607..18068
DNA (462bp) protein (154aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=7 Tax=Clostridium perfringens RepID=H7CVZ1_CLOPF
RNA methyltransferase
L2_041_124G1_scaffold_127_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18083..18922
DNA (840bp) protein (280aa)
DegV family protein n=2 Tax=Clostridium perfringens RepID=Q0TQY0_CLOP1
degV family protein
DegV family protein {ECO:0000313|EMBL:EDT25651.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L2_041_124G1_scaffold_127_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19013..20083
DNA (1071bp) protein (357aa)
Lipoprotein, BMP family n=4 Tax=Clostridium perfringens RepID=Q0TQY1_CLOP1
Bmp family lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:BAB81015.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_127_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20709..21224
DNA (516bp) protein (172aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CVY8_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDS80744.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_041_124G1_scaffold_127_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21205..21972
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTE9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT70647.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L2_041_124G1_scaffold_127_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22224..23609
DNA (1386bp) protein (462aa)
rpoN; RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=3 Tax=Clostridium perfringens RepID=B1RTF0_CLOPF
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EDT70663.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_041_124G1_scaffold_127_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23754..24860
DNA (1107bp) protein (369aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQY6_CLOPF
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB81011.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_127_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24950..25948
DNA (999bp) protein (333aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=10 Tax=Clostridium perfringens RepID=H7CVY4_CLOPF
L2_041_124G1_scaffold_127_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26092..27285
DNA (1194bp) protein (398aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Phosphoglycerate kinase n=2 Tax=Clostridium perfringens RepID=PGK_CLOPS
L2_041_124G1_scaffold_127_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27529..28275
DNA (747bp) protein (249aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Triosephosphate isomerase n=16 Tax=Clostridium RepID=TPIS_CLOP1
L2_041_124G1_scaffold_127_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28400..29938
DNA (1539bp) protein (513aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
pgm; phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=3 Tax=Clostridium perfringens RepID=B1RBC6_CLOPF
L2_041_124G1_scaffold_127_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30508..31965
DNA (1458bp) protein (486aa)
Amino acid antiporter n=5 Tax=Clostridium perfringens RepID=H7CVY0_CLOPF
Glutamate:gamma-aminobutyrate antiporter family protein {ECO:0000313|EMBL:EDT13694.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
amino acid antiporter
L2_041_124G1_scaffold_127_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32164..32304
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CVX9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13690.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying items 1-30 of 32 in total

View Taxonomy