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L2_041_124G1_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_134_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..575)
DNA (573bp) protein (191aa)
UBA/TS-N domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CY39_CLOPF
UBA/TS-N domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81719.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_134_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(563..1234)
DNA (672bp) protein (224aa)
DNA repair protein RecO n=2 Tax=Clostridium perfringens RepID=RECO_CLOPE
recO; DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_134_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1334..2224)
DNA (891bp) protein (297aa)
GTPase Era n=8 Tax=Clostridium perfringens RepID=ERA_CLOPS
era; GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_134_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2233..2631)
DNA (399bp) protein (133aa)
cdd; cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:EDT16289.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EDT16289.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cytidine deaminase n=6 Tax=Clostridium perfringens RepID=H7CY42_CLOPF
L2_041_124G1_scaffold_134_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2672..3373)
DNA (702bp) protein (234aa)
Diacylglycerol kinase/PAP2 family protein n=8 Tax=Clostridium perfringens RepID=H7CY43_CLOPF
diacylglycerol kinase/PAP2 family protein
Diacylglycerol kinase/PAP2 family protein {ECO:0000313|EMBL:EDT25362.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_041_124G1_scaffold_134_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3401..3907)
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Endoribonuclease YbeY n=5 Tax=Clostridium perfringens RepID=YBEY_CLOP1
metalloprotease
L2_041_124G1_scaffold_134_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3909..5972)
DNA (2064bp) protein (688aa)
Putative hydrolase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLF9_CLOPF
Putative hydrolase {ECO:0000313|EMBL:EIA16422.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hydrolase
L2_041_124G1_scaffold_134_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6009..7145)
DNA (1137bp) protein (379aa)
Sporulation protein YqfD n=3 Tax=Clostridium perfringens RepID=H1CT02_CLOPF
stage IV sporulation protein
Putative stage IV sporulation protein {ECO:0000313|EMBL:EIA16423.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_134_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7147..7428)
DNA (282bp) protein (94aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XIU2_CLOPE
sporulation protein YqfC
Uncharacterized protein {ECO:0000313|EMBL:BAB81727.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_041_124G1_scaffold_134_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7653..8102)
DNA (450bp) protein (150aa)
GatB/Yqey domain-containing protein n=11 Tax=Clostridium perfringens RepID=H7CY48_CLOPF
GatB/Yqey domain-containing protein
GatB/Yqey domain-containing protein {ECO:0000313|EMBL:EIA16425.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_134_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8152..8328)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=11 Tax=Clostridium perfringens RepID=RS21_CLOP1
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_134_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8448..8792)
DNA (345bp) protein (115aa)
HIT family protein n=5 Tax=Clostridium perfringens RepID=H7CY50_CLOPF
HIT family protein {ECO:0000313|EMBL:EDT70362.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
HIT family protein
L2_041_124G1_scaffold_134_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8861..10165)
DNA (1305bp) protein (435aa)
MiaB-like tRNA modifying enzyme n=2 Tax=Clostridium perfringens RepID=Q0TNT5_CLOP1
MiaB-like tRNA modifying enzyme
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EDT70368.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_041_124G1_scaffold_134_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10165..10917)
DNA (753bp) protein (251aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLG6_CLOPF
16S ribosomal RNA methyltransferase RsmE
L2_041_124G1_scaffold_134_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10940..11881)
DNA (942bp) protein (314aa)
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribosomal protein L11 methyltransferase n=8 Tax=Clostridium perfringens RepID=PRMA_CLOPE
L2_041_124G1_scaffold_134_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12107..12463)
DNA (357bp) protein (119aa)
GntR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CY54_CLOPF
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EIA16431.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_134_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12465..13643)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNT1_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70370.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_041_124G1_scaffold_134_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13659..14486)
DNA (828bp) protein (276aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNT0_CLOP1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT70363.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L2_041_124G1_scaffold_134_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14473..15165)
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium perfringens RepID=H7CY57_CLOPF
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIA16434.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L2_041_124G1_scaffold_134_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15341..16504)
DNA (1164bp) protein (388aa)
Chaperone protein DnaJ n=9 Tax=Clostridium perfringens RepID=DNAJ_CLOPE
dnaJ; molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_134_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16618..18477)
DNA (1860bp) protein (620aa)
Chaperone protein DnaK n=10 Tax=Clostridium perfringens RepID=DNAK_CLOP1
Chaperone protein DnaK; HSP70; Heat shock 70 kDa protein; Heat shock protein 70; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
dnaK; molecular chaperone DnaK
L2_041_124G1_scaffold_134_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18534..19160)
DNA (627bp) protein (209aa)
Protein GrpE n=5 Tax=Clostridium perfringens RepID=GRPE_CLOP1
grpE; heat shock protein GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_134_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19191..20210)
DNA (1020bp) protein (340aa)
Heat-inducible transcription repressor HrcA n=2 Tax=Clostridium perfringens RepID=HRCA_CLOP1
hrcA; heat-inducible transcription repressor
Heat-inducible transcription repressor HrcA {ECO:0000255|HAMAP-Rule:MF_00081}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
L2_041_124G1_scaffold_134_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20407..21540)
DNA (1134bp) protein (378aa)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPJ3_CLOPF
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EDT16218.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hemN; coproporphyrinogen III oxidase
L2_041_124G1_scaffold_134_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21790..22059)
DNA (270bp) protein (90aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XIS7_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16279.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L2_041_124G1_scaffold_134_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22320..24122)
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Elongation factor 4 n=6 Tax=Clostridium perfringens RepID=LEPA_CLOP1
lepA; GTP-binding protein LepA
L2_041_124G1_scaffold_134_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24243..24593)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNS1_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25257.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L2_041_124G1_scaffold_134_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24660..25745)
DNA (1086bp) protein (362aa)
Stage II sporulation protein P n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPI9_CLOPF
Stage II sporulation protein P {ECO:0000313|EMBL:EDT16356.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
stage II sporulation protein P
L2_041_124G1_scaffold_134_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25894..26871)
DNA (978bp) protein (326aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
gpr; germination protease (EC:3.4.24.78)
Germination protease n=2 Tax=Clostridium perfringens RepID=H7CY67_CLOPF
L2_041_124G1_scaffold_134_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27067..27330
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=8 Tax=Clostridium perfringens RepID=RS20_CLOP1
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying items 1-30 of 39 in total

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