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L2_041_124G1_scaffold_188

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_188_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..509)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AML6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33347.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_188_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

823..1254
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QS75_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33348.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_124G1_scaffold_188_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1314..1865)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKP0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33349.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_124G1_scaffold_188_4
unknown

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2054..2146
DNA (93bp) protein (31aa)

This feature has no annotations

L2_041_124G1_scaffold_188_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2242..2874)
DNA (633bp) protein (211aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0X9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85331.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
L2_041_124G1_scaffold_188_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2897..3844)
DNA (948bp) protein (316aa)
2-dehydro-3-deoxygluconate kinase {ECO:0000313|EMBL:KJZ85326.1}; EC=2.7.1.45 {ECO:0000313|EMBL:KJZ85326.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
2-keto-3-deoxygluconate kinase n=4 Tax=Clostridium butyricum RepID=B1QS78_CLOBU
ribokinase-like domain-containing protein
L2_041_124G1_scaffold_188_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4042..4173)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QS79_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97431.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_041_124G1_scaffold_188_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4410..4709)
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS80_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85349.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_041_124G1_scaffold_188_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5010..5384)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AAB2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33353.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_124G1_scaffold_188_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5519..8965)
DNA (3447bp) protein (1149aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pyc; pyruvate carboxylase (EC:6.4.1.1)
Pyruvate carboxylase n=2 Tax=Clostridium butyricum RepID=M8K7E0_CLOBU
L2_041_124G1_scaffold_188_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9415..9639)
DNA (225bp) protein (75aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS83_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85350.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_188_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9998..10789)
DNA (792bp) protein (264aa)
Phosphoglycolate phosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JBQ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85347.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nagD2; protein NagD
L2_041_124G1_scaffold_188_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10992..12716)
DNA (1725bp) protein (575aa)
Neopullulanase {ECO:0000313|EMBL:EEP52963.1}; EC=3.2.1.135 {ECO:0000313|EMBL:EEP52963.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Cyclomaltodextrinase (EC:3.2.1.54)
Neopullulanase n=2 Tax=Clostridium butyricum RepID=B1QS85_CLOBU
L2_041_124G1_scaffold_188_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12762..13670)
DNA (909bp) protein (303aa)
UPI0003D5EF01 related cluster n=1 Tax=unknown RepID=UPI0003D5EF01
Maltose ABC transporter, permease protein {ECO:0000313|EMBL:ETI88960.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L2_041_124G1_scaffold_188_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13663..14607)
DNA (945bp) protein (315aa)
Maltose transport system permease protein MalF n=2 Tax=Clostridium butyricum RepID=B1QS87_CLOBU
Maltose/maltodextrin ABC transporter, permease protein MalF {ECO:0000313|EMBL:KJZ85345.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
maltose/maltodextrin ABC transporter permease
L2_041_124G1_scaffold_188_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14639..15862)
DNA (1224bp) protein (408aa)
Maltose-binding periplasmic protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KFM8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33360.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
maltose/maltodextrin ABC transporter maltose/maltodextrin-binding protein
L2_041_124G1_scaffold_188_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16088..16798
DNA (711bp) protein (237aa)
Helix-turn-helix-domain containing protein, AraC type n=3 Tax=Clostridium butyricum RepID=M8JBP6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85354.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
AraC family transcriptional regulator
L2_041_124G1_scaffold_188_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16911..18344)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMM9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33362.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
yknZ; ABC transporter permease YknZ
L2_041_124G1_scaffold_188_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18335..19072)
DNA (738bp) protein (246aa)
Macrolide export ATP-binding/permease protein MacB n=2 Tax=Clostridium butyricum RepID=M8JMQ2_CLOBU
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:ETI88965.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_041_124G1_scaffold_188_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19077..20570)
DNA (1494bp) protein (498aa)
Secretion protein HlyD family protein n=2 Tax=Clostridium butyricum RepID=M8JLE7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33364.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
secretion protein HlyD family protein
L2_041_124G1_scaffold_188_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20572..21822)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0Z1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33365.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_188_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21989..22687)
DNA (699bp) protein (233aa)
Transcriptional regulatory protein ResD n=2 Tax=Clostridium butyricum RepID=B1QS93_CLOBU
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:EEP53284.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
srrA2; transcriptional regulatory protein SrrA
L2_041_124G1_scaffold_188_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22716..24176)
DNA (1461bp) protein (487aa)
Two-component sensor kinase yycG {ECO:0000313|EMBL:KJZ85320.1}; EC=2.7.3.- {ECO:0000313|EMBL:KJZ85320.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Clostridium butyricum RepID=M8JC95_CLOBU
integral membrane sensor signal transduction histidine kinase
L2_041_124G1_scaffold_188_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24428..25102
DNA (675bp) protein (225aa)
Putative RNAase regulator n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMP8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85356.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
macro domain-containing protein
L2_041_124G1_scaffold_188_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25321..25419)
DNA (99bp) protein (33aa)
Rubrerythrin n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K8Z9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86159.1}; Flags: Fragment;; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rubrerythrin
Displaying 25 items

View Taxonomy