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L2_041_124G1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_260_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1340)
DNA (1338bp) protein (446aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9D2_CLOBU
L2_041_124G1_scaffold_260_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1798..2736)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9L5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96193.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
G3E family GTPase-like protein
L2_041_124G1_scaffold_260_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2780..3871)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUN9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36479.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cobalamin synthesis protein, P47K
L2_041_124G1_scaffold_260_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4246..4446)
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QXL5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53993.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_041_124G1_scaffold_260_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4471..5334)
DNA (864bp) protein (288aa)
Acetyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KE53_CLOBU
Acetyltransferase Iojap substitute {ECO:0000313|EMBL:KJZ86947.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GCN5-related N-acetyltransferase
L2_041_124G1_scaffold_260_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5575..7479)
DNA (1905bp) protein (635aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=4 Tax=Clostridium butyricum RepID=B1QXL7_CLOBU
L2_041_124G1_scaffold_260_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7430..7543)
DNA (114bp) protein (38aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JJ97_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54293.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_041_124G1_scaffold_260_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7530..8198)
DNA (669bp) protein (223aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cmk; cytidylate kinase Cmk (EC:2.7.4.25)
UPI0003D67073 related cluster n=1 Tax=unknown RepID=UPI0003D67073
L2_041_124G1_scaffold_260_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8293..9501)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JA83_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86937.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_260_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9649..10161)
DNA (513bp) protein (171aa)
ErfK/YbiS/YcfS/YnhG family n=2 Tax=Clostridium butyricum RepID=B1QXL9_CLOBU
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EEP53495.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ErfK/YbiS/YcfS/YnhG family protein
L2_041_124G1_scaffold_260_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10247..10864)
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXM0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36472.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_260_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11139..12260)
DNA (1122bp) protein (374aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9C1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86940.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_041_124G1_scaffold_260_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12348..13604)
DNA (1257bp) protein (419aa)
GntP family permease n=4 Tax=Clostridium butyricum RepID=B1QXM2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36470.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
GntP family permease
L2_041_124G1_scaffold_260_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13725..14792)
DNA (1068bp) protein (356aa)
Transcriptional regulator, CdaR n=3 Tax=Clostridium butyricum RepID=C4IGN6_CLOBU
Transcriptional regulator, CdaR {ECO:0000313|EMBL:EEP53322.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative carbohydrate diacid regulator
L2_041_124G1_scaffold_260_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14912..16087)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AJA8_CLOBU
LSU m5C1962 methyltransferase RlmI {ECO:0000313|EMBL:KJZ86938.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
methyltransferase
L2_041_124G1_scaffold_260_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16241..17761)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K5X6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86939.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_260_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17832..18782)
DNA (951bp) protein (317aa)
Myosin-crossreactive antigen n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9B7_CLOBU
Putative antigen {ECO:0000313|EMBL:KJZ86932.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
myosin-cross-reactive antigen
L2_041_124G1_scaffold_260_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18760..19719)
DNA (960bp) protein (320aa)
Myosin-crossreactive antigen n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9B7_CLOBU
Myosin-crossreactive antigen {ECO:0000313|EMBL:ENZ36466.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
myosin-cross-reactive antigen
L2_041_124G1_scaffold_260_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19920..20753)
DNA (834bp) protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
nfo; putative endonuclease 4 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKM7_CLOBU
L2_041_124G1_scaffold_260_20
unknown

Not on your lists

comp(20707..20904)
DNA (198bp) protein (66aa)

This feature has no annotations

L2_041_124G1_scaffold_260_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20993..21313)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JA96_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86957.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_260_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21402..22415)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJA5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ36463.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
L2_041_124G1_scaffold_260_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22510..23253)
DNA (744bp) protein (248aa)
Hydroxymethylpyrimidine ABC transporter, permease n=2 Tax=Clostridium butyricum RepID=M8K5Y2_CLOBU
Hydroxymethylpyrimidine ABC transporter, transmembrane component {ECO:0000313|EMBL:KJZ86951.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_041_124G1_scaffold_260_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23282..23902)
DNA (621bp) protein (207aa)
Aliphatic sulfonates import ATP-binding protein SsuB n=2 Tax=Clostridium butyricum RepID=M8JJB4_CLOBU
Hydroxymethylpyrimidine ABC transporter, ATPase component {ECO:0000313|EMBL:KJZ86949.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_041_124G1_scaffold_260_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23944..24267)
DNA (324bp) protein (108aa)
Putative transcription activator (EC:3.5.99.2)
Tena/thi-4 family n=2 Tax=Clostridium butyricum RepID=B1R2L4_CLOBU
TENA/THI-4 family protein {ECO:0000313|EMBL:EEP53645.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_041_124G1_scaffold_260_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24234..24524)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z9J2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ86958.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional activator, TenA family
L2_041_124G1_scaffold_260_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24980..25249)
DNA (270bp) protein (90aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2L5_CLOBU
TIGR04076 family protein {ECO:0000313|EMBL:ENZ36459.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_260_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25272..26045)
DNA (774bp) protein (258aa)
Polar amino acid ABC transporter ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJA2_CLOBU
Polar amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ36458.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glnQ1; glutamine transport ATP-binding protein GlnQ
L2_041_124G1_scaffold_260_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26271..27035)
DNA (765bp) protein (255aa)
Glutamine ABC transporter, permease/substrate-binding protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IGQ0_CLOBU
Amino acid ABC transporter, glutamine-binding protein/permease protein {ECO:0000313|EMBL:KJZ86928.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glnP1; glutamine transport system permease protein GlnP
L2_041_124G1_scaffold_260_30
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27065..27913)
DNA (849bp) protein (283aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKN8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87816.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hisJ; histidine-binding protein HisJ
Displaying items 1-30 of 34 in total

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