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L2_041_124G1_scaffold_273

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_273_1
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1557
DNA (1557bp) protein (519aa)
CotH protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K971_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92777.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
CotH protein
L2_041_124G1_scaffold_273_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1669..1947)
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1Y3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84643.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_041_124G1_scaffold_273_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2454..5612
DNA (3159bp) protein (1053aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ileS; isoleucine--tRNA ligase IleS (EC:6.1.1.5)
Isoleucine--tRNA ligase n=2 Tax=Clostridium butyricum RepID=M8JFQ8_CLOBU
L2_041_124G1_scaffold_273_4

Not on your lists

5837..6835
DNA (999bp) protein (333aa)
Catabolite control protein A n=3 Tax=Clostridium butyricum RepID=B1R1Y1_CLOBU
Catabolite control protein A {ECO:0000313|EMBL:ETJ16572.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
regA; HTH-type transcriptional regulator RegA
L2_041_124G1_scaffold_273_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6995..7444
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=4 Tax=Clostridium butyricum RepID=B1R1Y0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85815.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
transcriptional regulator, TrmB
L2_041_124G1_scaffold_273_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7444..8823
DNA (1380bp) protein (460aa)
Mate efflux family protein n=2 Tax=Clostridium butyricum RepID=M8K968_CLOBU
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pump {ECO:0000313|EMBL:KJZ84668.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mate efflux family protein
L2_041_124G1_scaffold_273_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8883..9071)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1X8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84644.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_273_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9283..9858
DNA (576bp) protein (192aa)
Spore maturation protein A n=4 Tax=Clostridium butyricum RepID=C4IMI1_CLOBU
Spore maturation protein A {ECO:0000313|EMBL:EEP52481.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
spmA; spore maturation protein A
L2_041_124G1_scaffold_273_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9872..10396
DNA (525bp) protein (175aa)
Spore maturation protein B n=3 Tax=Clostridium butyricum RepID=C4IMI2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94925.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
spmB; spore maturation protein B
L2_041_124G1_scaffold_273_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10507..11754
DNA (1248bp) protein (416aa)
pepP; Xaa-Pro aminopeptidase PepP (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=3 Tax=Clostridium butyricum RepID=B1R1X6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29638.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_124G1_scaffold_273_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12282..12980
DNA (699bp) protein (233aa)
Na+/H+ antiporter family protein n=2 Tax=Clostridium butyricum RepID=B1R1X5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29637.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Na+/H+ antiporter family
L2_041_124G1_scaffold_273_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12977..13771
DNA (795bp) protein (265aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEL8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29637.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Na+/H+ antiporter family
L2_041_124G1_scaffold_273_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13860..14372)
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1X4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29636.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_273_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


15091..17034
DNA (1944bp) protein (648aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQB5_CLOBU
L2_041_124G1_scaffold_273_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17148..18776
DNA (1629bp) protein (543aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metG2; methionine--tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA72_CLOBU
Methionyl-tRNA synthetase suspected. See adjacent gene [L2_041_124G1_scaffold_273_14].
L2_041_124G1_scaffold_273_16

Not on your lists

18943..19728
DNA (786bp) protein (262aa)
Hydrolase, TatD family n=2 Tax=Clostridium butyricum RepID=C4IMI8_CLOBU
Hydrolase, TatD family {ECO:0000313|EMBL:ETJ16561.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Mg-dependent deoxyribonuclease TatD family
L2_041_124G1_scaffold_273_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20161..21219
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ABW6_CLOBU
Cell wall-binding protein {ECO:0000313|EMBL:KJZ84702.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
3D domain-containing protein
L2_041_124G1_scaffold_273_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21446..22021
DNA (576bp) protein (192aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rnmV; ribonuclease M5 (EC:3.1.26.8)
Ribonuclease M5 n=4 Tax=Clostridium butyricum RepID=B1R1W9_CLOBU
L2_041_124G1_scaffold_273_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22022..22867
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
rsmA; ribosomal RNA small subunit methyltransferase A (EC:2.1.1.182)
Ribosomal RNA small subunit methyltransferase A n=4 Tax=Clostridium butyricum RepID=B1R1W8_CLOBU
L2_041_124G1_scaffold_273_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23003..24520
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA65_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29629.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_273_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24536..25096
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1W6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29628.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_273_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25205..25975
DNA (771bp) protein (257aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
lgt1; prolipoprotein diacylglyceryl transferase Lgt (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=3 Tax=Clostridium butyricum RepID=B1R1W5_CLOBU
L2_041_124G1_scaffold_273_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25989..26795
DNA (807bp) protein (269aa)
Lipoprotein n=2 Tax=Clostridium butyricum RepID=M8J5M8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92351.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_041_124G1_scaffold_273_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26813..27658
DNA (846bp) protein (282aa)
Mrp protein n=4 Tax=Clostridium butyricum RepID=B1R1W3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92350.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
mrp; protein Mrp
L2_041_124G1_scaffold_273_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27958..28146
DNA (189bp) protein (63aa)
Ferredoxin n=4 Tax=Clostridium butyricum RepID=B1R1W1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92353.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ferredoxin
L2_041_124G1_scaffold_273_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28210..28416)
DNA (207bp) protein (69aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1W0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29623.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_273_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28525..28983)
DNA (459bp) protein (153aa)
Transcriptional regulator, PadR family n=2 Tax=Clostridium butyricum RepID=M8K9C0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ29622.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, PadR family
L2_041_124G1_scaffold_273_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28986..29831)
DNA (846bp) protein (282aa)
DegV family protein n=4 Tax=Clostridium butyricum RepID=B1R1V8_CLOBU
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENZ29621.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
DegV domain-containing protein
L2_041_124G1_scaffold_273_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30197..32305
DNA (2109bp) protein (703aa)
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Clostridium butyricum RepID=B1R1V7_CLOBU
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ENZ29620.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
anaerobic ribonucleoside triphosphate reductase
L2_041_124G1_scaffold_273_30
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32632..33798
DNA (1167bp) protein (389aa)
Homocitrate synthase n=4 Tax=Clostridium butyricum RepID=B1R1V6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ92918.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
aksA; trans-homoaconitate synthase
Displaying items 1-30 of 32 in total

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