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L2_041_124G1_scaffold_297

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_297_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..348)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKC9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88738.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_297_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(544..1251)
DNA (708bp) protein (236aa)
Iron-sulfur flavoprotein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX9_CLOBU
Iron-sulfur flavoprotein {ECO:0000313|EMBL:KJZ88737.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NADPH-dependent FMN reductase
L2_041_124G1_scaffold_297_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1315..1437
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZI9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96274.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
L2_041_124G1_scaffold_297_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1752..3065
DNA (1314bp) protein (438aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX6_CLOBU
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEP56321.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
aminoglycoside phosphotransferase
L2_041_124G1_scaffold_297_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3321..3848)
DNA (528bp) protein (176aa)
Riboflavin biosynthesis protein RibD C-domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J3X8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88729.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RibD domain-containing protein
L2_041_124G1_scaffold_297_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4154..5710
DNA (1557bp) protein (519aa)
diguanylate cyclase (EC:2.7.7.65)
Diguanylate cyclase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX4_CLOBU
Diguanylate cyclase {ECO:0000313|EMBL:EEP56477.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L2_041_124G1_scaffold_297_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5715..6419
DNA (705bp) protein (235aa)
DNA-binding response regulator n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX3_CLOBU
DNA-binding response regulator {ECO:0000313|EMBL:EEP56548.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
two component transcriptional regulator, winged helix family
L2_041_124G1_scaffold_297_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6469..8004
DNA (1536bp) protein (512aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Putative two-component sensor histidine kinase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX2_CLOBU
integral membrane sensor signal transduction histidine kinase
L2_041_124G1_scaffold_297_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8522..10339
DNA (1818bp) protein (606aa)
Putative sensor histidine kinase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX1_CLOBU
Putative sensor histidine kinase {ECO:0000313|EMBL:EEP56129.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
membrane-associated ATP-binding domain-containing protein
L2_041_124G1_scaffold_297_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10401..11132
DNA (732bp) protein (244aa)
Two-component response regulator n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAX0_CLOBU
Two-component response regulator {ECO:0000313|EMBL:EEP56095.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
LytTR family two component transcriptional regulator
L2_041_124G1_scaffold_297_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11568..13238
DNA (1671bp) protein (557aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAW9_CLOBU
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEP56021.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
methyl-accepting chemotaxis sensory transducer
L2_041_124G1_scaffold_297_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13435..13659
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YY80_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88772.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_297_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13625..13846
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IAW8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP56281.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L2_041_124G1_scaffold_297_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14098..15060
DNA (963bp) protein (321aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
tRNA-dihydrouridine synthase n=2 Tax=Clostridium butyricum RepID=M8JCW6_CLOBU
dihydrouridine synthase family protein
L2_041_124G1_scaffold_297_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15229..15879
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0A835_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88769.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L2_041_124G1_scaffold_297_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16003..16443)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K7L8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88642.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_297_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16784..17380
DNA (597bp) protein (199aa)
Glycerol-3-phosphate responsive antiterminator n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J3X5_CLOBU
Glycerol-3-phosphate responsive antiterminator {ECO:0000313|EMBL:ETI88799.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
glpP; glycerol uptake operon antiterminator regulatory protein GlpP
L2_041_124G1_scaffold_297_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17529..18326
DNA (798bp) protein (266aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JE74_CLOBU
Cof-like hydrolase {ECO:0000313|EMBL:ENZ32596.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_297_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18431..19726
DNA (1296bp) protein (432aa)
sn-glycerol 3-phosphate ABC transporter substrate-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKE1_CLOBU
sn-glycerol 3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ32597.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
family 1 extracellular solute-binding protein
L2_041_124G1_scaffold_297_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19829..20734
DNA (906bp) protein (302aa)
ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZI0_CLOBU
ABC transporter permease {ECO:0000313|EMBL:KHD15289.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transporter
L2_041_124G1_scaffold_297_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20724..21551
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=2 Tax=Clostridium butyricum RepID=M8K7L5_CLOBU
sn-glycerol 3-phosphate ABC transporter permease {ECO:0000313|EMBL:ENZ32599.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter
L2_041_124G1_scaffold_297_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21561..22673
DNA (1113bp) protein (371aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Maltose/maltodextrin ABC transporter ATP-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YYP8_CLOBU
Maltose/maltodextrin ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ32600.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_124G1_scaffold_297_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22700..23500
DNA (801bp) protein (267aa)
Putative sugar phosphate isomerase/epimerase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JE70_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96262.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
sugar phosphate isomerase/epimerase
L2_041_124G1_scaffold_297_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23677..25401
DNA (1725bp) protein (575aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCV8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32602.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter, ATP-binding/permease protein
L2_041_124G1_scaffold_297_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25382..27136
DNA (1755bp) protein (585aa)
UPI0003D5BE1A related cluster n=1 Tax=unknown RepID=UPI0003D5BE1A
Uncharacterized protein {ECO:0000313|EMBL:KJZ96254.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative ABC transporter ATP-binding protein TM_0288
L2_041_124G1_scaffold_297_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27247..28524
DNA (1278bp) protein (426aa)
Guanine deaminase (EC:3.5.4.3)
Guanine deaminase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIK3_CLOBU
Guanine deaminase {ECO:0000313|EMBL:ENZ32604.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L2_041_124G1_scaffold_297_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28704..29888
DNA (1185bp) protein (395aa)
Threonine dehydratase {ECO:0000313|EMBL:KJZ88705.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KJZ88705.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Diaminopropionate ammonia-lyase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J3W8_CLOBU
diaminopropionate ammonia-lyase
L2_041_124G1_scaffold_297_28
unknown

Not on your lists

30127..30222
DNA (96bp) protein (32aa)

This feature has no annotations

L2_041_124G1_scaffold_297_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30162..30767
DNA (606bp) protein (202aa)
UPI0003D66450 related cluster n=1 Tax=unknown RepID=UPI0003D66450
Peptidase M20 {ECO:0000313|EMBL:ETI88788.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Displaying 29 items

View Taxonomy