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L2_041_124G1_scaffold_320

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_320_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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300..1754
DNA (1455bp) protein (485aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
guaB; inosine-5'-monophosphate dehydrogenase GuaB (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1Z7_CLOBU
L2_041_124G1_scaffold_320_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1880..3421
DNA (1542bp) protein (514aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
guaA; GMP synthase (EC:6.3.5.2)
UPI0003D5971A related cluster n=1 Tax=unknown RepID=UPI0003D5971A
L2_041_124G1_scaffold_320_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3780..4904
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE39_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30407.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_320_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5160..5648
DNA (489bp) protein (163aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1N5_CLOBU
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ30408.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RNA polymerase subunit sigma-24
L2_041_124G1_scaffold_320_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5645..6532
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACA4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97267.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L2_041_124G1_scaffold_320_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7171..8334
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSJ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97268.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
FliB domain protein
L2_041_124G1_scaffold_320_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8695..9705
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS21_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30411.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L2_041_124G1_scaffold_320_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9930..11318
DNA (1389bp) protein (463aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pgi; glucose-6-phosphate isomerase Pgi (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=5 Tax=Clostridium butyricum RepID=B1R095_CLOBU
L2_041_124G1_scaffold_320_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11324..11770
DNA (447bp) protein (149aa)
UPF0178 protein CBDKU1_27660 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAB0_CLOBU
UPF0178 protein HMPREF1084_03799 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein DUF188
L2_041_124G1_scaffold_320_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11965..14406
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACA8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83358.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Y_Y_Y domain containing protein
L2_041_124G1_scaffold_320_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14461..15288
DNA (828bp) protein (276aa)
UPI0003D65E26 related cluster n=1 Tax=unknown RepID=UPI0003D65E26
Lytic murein transglycosylase {ECO:0000313|EMBL:ETI91572.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
lytic transglycosylase, catalytic
L2_041_124G1_scaffold_320_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15510..16163
DNA (654bp) protein (218aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ytzG1; RNA pseudouridine synthase YtzG (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGR2_CLOBU
L2_041_124G1_scaffold_320_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16757..20110
DNA (3354bp) protein (1118aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K259_CLOBU
L2_041_124G1_scaffold_320_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20286..22277
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
ligA; DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=2 Tax=Clostridium butyricum RepID=M8KAD8_CLOBU
L2_041_124G1_scaffold_320_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22282..22554
DNA (273bp) protein (91aa)
UPI0003D60D70 related cluster n=1 Tax=unknown RepID=UPI0003D60D70
Uncharacterized protein {ECO:0000313|EMBL:ETI91568.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L2_041_124G1_scaffold_320_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23073..24530
DNA (1458bp) protein (486aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
UPI00039D444D related cluster n=1 Tax=unknown RepID=UPI00039D444D
L2_041_124G1_scaffold_320_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24550..25980
DNA (1431bp) protein (477aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Clostridium butyricum RepID=M8K256_CLOBU
L2_041_124G1_scaffold_320_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26035..26337)
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0A5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83350.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_320_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26541..28028
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSL0_CLOBU
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:KJZ83355.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
peptide ABC transporter periplasmic protein
Displaying 19 items

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