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L2_041_124G1_scaffold_662

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_041_124G1_scaffold_662_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..776)
DNA (774bp) protein (258aa)
Transcriptional regulator n=3 Tax=Clostridium butyricum RepID=B1QW74_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32724.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
RpiR family transcriptional regulator
L2_041_124G1_scaffold_662_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(806..1888)
DNA (1083bp) protein (361aa)
Outer surface protein n=3 Tax=Clostridium butyricum RepID=B1QW75_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85584.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_662_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1904..3112)
DNA (1209bp) protein (403aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
anmK; Anhydro-N-acetylmuramic acid kinase (AnhMurNAckinase) (EC:2.7.1.-)
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7U2_CLOBU
L2_041_124G1_scaffold_662_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3087..3983)
DNA (897bp) protein (299aa)
ATPase family protein n=4 Tax=Clostridium butyricum RepID=B1QW77_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85611.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
BadF/BadG/BcrA/BcrD type ATPase
L2_041_124G1_scaffold_662_5
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4155..5123)
DNA (969bp) protein (323aa)
Tat pathway signal sequence n=1 Tax=Prevotella sp. CAG:279 RepID=R7HMF1_9BACT
Tat pathway signal sequence {ECO:0000313|EMBL:CDE40824.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:279.;"
Tat (twin-arginine translocation) pathway signal sequence
L2_041_124G1_scaffold_662_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5228..5524)
DNA (297bp) protein (99aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QW78_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85601.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L2_041_124G1_scaffold_662_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5595..5900)
DNA (306bp) protein (102aa)
Lichenan-specific phosphotransferase enzyme iia component {ECO:0000313|EMBL:EEP56108.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP56108.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Lichenan-specific phosphotransferase enzyme iia component n=2 Tax=Clostridium butyricum RepID=B1QW79_CLOBU
PTS system lactose/cellobiose-specific transporter subunit IIA
L2_041_124G1_scaffold_662_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5921..7231)
DNA (1311bp) protein (437aa)
6-phospho-beta-glucosidase (Cellobiose-6-phosphatehydrolase) n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J450_CLOBU
Diacetylchitobiose-6-phosphate hydrolase {ECO:0000313|EMBL:KHD14443.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glycoside hydrolase
L2_041_124G1_scaffold_662_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7300..8454)
DNA (1155bp) protein (385aa)
Lichenan permease iic component n=2 Tax=Clostridium butyricum RepID=B1QW81_CLOBU
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
PTS system lactose/cellobiose family IIC subunit
L2_041_124G1_scaffold_662_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8482..8877)
DNA (396bp) protein (132aa)
PTS system, diacetylchitobiose-specific IIB component n=4 Tax=Clostridium butyricum RepID=B1QW82_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85609.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phosphotransferase system, lactose/cellobiose-specific IIB subunit
L2_041_124G1_scaffold_662_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8840..9745)
DNA (906bp) protein (302aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
murQ; N-acetylmuramic acid-6-phosphate etherase (EC:4.2.-.-)
N-acetylmuramic acid 6-phosphate etherase n=4 Tax=Clostridium butyricum RepID=B1QW83_CLOBU
L2_041_124G1_scaffold_662_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10301..10726)
DNA (426bp) protein (142aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEG7_CLOBU
Acetyltransferase {ECO:0000313|EMBL:KJZ85599.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GCN5-related N-acetyltransferase
L2_041_124G1_scaffold_662_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10924..11790)
DNA (867bp) protein (289aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J454_CLOBU
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ETI88375.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NAD-dependent epimerase/dehydratase
L2_041_124G1_scaffold_662_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12014..12838)
DNA (825bp) protein (275aa)
Transcriptional regulator n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7U9_CLOBU
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ85593.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
transcriptional activator ligand binding domain-containing protein
L2_041_124G1_scaffold_662_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13060..13731)
DNA (672bp) protein (224aa)
Iron-sulfur cluster-binding protein, Rieske family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZT0_CLOBU
FAD dependent oxidoreductase {ECO:0000313|EMBL:EKY26446.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
glycine/D-amino acid oxidase
L2_041_124G1_scaffold_662_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14137..14637)
DNA (501bp) protein (167aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium butyricum RepID=M8JD51_CLOBU
PhnO protein {ECO:0000313|EMBL:KJZ85600.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
N-acetyltransferase GCN5
L2_041_124G1_scaffold_662_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14791..15777)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A8J0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32708.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Predicted permeases
L2_041_124G1_scaffold_662_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15912..16514)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J458_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32707.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying 18 items

View Taxonomy