ggKbase home page

L2_047_000G1_scaffold_14

Search features with annotation key words

Displaying items 1-30 of 244 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_14_1
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207..896
DNA (690bp) protein (230aa)
GntR-family transcriptional regulator n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A5D2_SERMA
Transcriptional regulator {ECO:0000313|EMBL:EZQ58875.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
GntR family transcriptional regulator
L2_047_000G1_scaffold_14_2
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

964..2379
DNA (1416bp) protein (472aa)
Major facilitator superfamily protein n=2 Tax=Serratia marcescens RepID=V6A584_SERMA
EmrB/QacA subfamily drug resistance transporter
Multidrug or homocysteine efflux system protein {ECO:0000313|EMBL:EZQ58874.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_14_3
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2376..3368)
DNA (993bp) protein (331aa)
Transcriptional repressor RbsR n=1 Tax=Serratia marcescens VGH107 RepID=M3CNQ5_SERMA
Transcriptional regulator {ECO:0000313|EMBL:KFF86658.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
transcriptional repressor RbsR
L2_047_000G1_scaffold_14_4
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3382..4308)
DNA (927bp) protein (309aa)
ribokinase (EC:2.7.1.15)
Ribokinase n=2 Tax=Serratia marcescens RepID=L7ZU64_SERMA
Ribokinase {ECO:0000313|EMBL:EZQ58872.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_14_5
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4370..5260)
DNA (891bp) protein (297aa)
D-ribose transporter subunit RbsB n=1 Tax=Serratia marcescens RepID=UPI0002E8EF3C
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:EZQ58871.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
rbsB; D-ribose transporter subunit RbsB
L2_047_000G1_scaffold_14_6
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5282..6250)
DNA (969bp) protein (323aa)
D-ribose transporter subunit RbsC n=3 Tax=Serratia marcescens RepID=L7ZTZ9_SERMA
rbsC; ribose ABC transporter permease protein
Ribose transport system permease rbsC {ECO:0000313|EMBL:EZQ58870.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_14_7
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6257..7762)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
D-ribose transporter ATP binding protein n=1 Tax=Serratia marcescens RepID=UPI00031F84E0
D-ribose transporter ATP binding protein
L2_047_000G1_scaffold_14_8
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7770..8189)
DNA (420bp) protein (140aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
D-ribose pyranase n=1 Tax=Serratia marcescens VGH107 RepID=M3CNQ8_SERMA
D-ribose pyranase
L2_047_000G1_scaffold_14_9
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8360..10228)
DNA (1869bp) protein (623aa)
Low affinity potassium transport system protein kup n=3 Tax=Serratia marcescens RepID=L7ZU68_SERMA
trkD; potassium transport protein Kup
Low affinity potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Kup system potassium uptake protein {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
L2_047_000G1_scaffold_14_10
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10449..12020
DNA (1572bp) protein (524aa)
Regulatory ATPase RavA n=1 Tax=Serratia marcescens WW4 RepID=L7ZM50_SERMA
ATPase ravA {ECO:0000313|EMBL:EZQ58866.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
ravA; regulatory ATPase RavA
L2_047_000G1_scaffold_14_11
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12023..13486
DNA (1464bp) protein (488aa)
Protein ViaA n=3 Tax=Serratia marcescens RepID=L7ZU06_SERMA
Protein ViaA {ECO:0000256|HAMAP-Rule:MF_01626, ECO:0000256|SAAS:SAAS00012203}; VWA domain protein interacting with AAA ATPase {ECO:0000256|HAMAP-Rule:MF_01626}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
hypothetical protein
L2_047_000G1_scaffold_14_12
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13493..14485)
DNA (993bp) protein (331aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Serratia marcescens EGD-HP20 RepID=U1W2P5_SERMA
L2_047_000G1_scaffold_14_13
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14641..15102
DNA (462bp) protein (154aa)
DNA-binding transcriptional dual regulator n=4 Tax=Serratia marcescens RepID=L7ZV52_SERMA
asnC; DNA-binding transcriptional dual regulator
Regulatory protein AsnC {ECO:0000313|EMBL:EZQ58863.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_14_14
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15203..15643
DNA (441bp) protein (147aa)
FMN-binding protein MioC n=1 Tax=Serratia marcescens WW4 RepID=L7ZU72_SERMA
mioC; FMN-binding protein MioC
FMN-binding protein MioC {ECO:0000313|EMBL:EZQ58862.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_14_15
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16024..17913
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Serratia marcescens RepID=UPI00030C85B6
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_14_16
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18052..18672
DNA (621bp) protein (207aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
16S rRNA methyltransferase GidB n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A5E8_SERMA
gidB; 16S rRNA methyltransferase GidB
L2_047_000G1_scaffold_14_17
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19312..19695
DNA (384bp) protein (128aa)
F0F1 ATP synthase subunit I n=3 Tax=Serratia marcescens RepID=L7ZF92_SERMA
atpI; ATP synthase, membrane-bound accessory subunit
F0F1 ATP synthase subunit I {ECO:0000313|EMBL:AGE15809.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_14_18
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19718..20497
DNA (780bp) protein (260aa)
ATP synthase subunit a n=1 Tax=Serratia marcescens WW4 RepID=L7ZDJ8_SERMA
atpB; F0F1 ATP synthase subunit a
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_14_19
Edwardsiella piscicida, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20547..20786
DNA (240bp) protein (80aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14)
ATP synthase subunit c n=39 Tax=Enterobacteriaceae RepID=ATPL_EDWI9
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1288122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella piscicida C07-087.;"
L2_047_000G1_scaffold_14_20
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20844..21314
DNA (471bp) protein (157aa)
ATP synthase subunit b n=5 Tax=Serratia RepID=L7ZF12_SERMA
atpF; F0F1 ATP synthase subunit b
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_14_21
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21329..21862
DNA (534bp) protein (178aa)
ATP synthase subunit delta n=1 Tax=Serratia marcescens WW4 RepID=L7Z8Y8_SERMA
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
atpH; F0F1 ATP synthase subunit delta
L2_047_000G1_scaffold_14_22
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21875..23416
DNA (1542bp) protein (514aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
F0F1 ATP synthase subunit alpha n=1 Tax=Serratia marcescens RepID=UPI0003104B82
L2_047_000G1_scaffold_14_23
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23476..24339
DNA (864bp) protein (288aa)
ATP synthase gamma chain n=4 Tax=Serratia marcescens RepID=L7ZDK4_SERMA
atpG; F1 sector of membrane-bound ATP synthase, gamma subunit
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
L2_047_000G1_scaffold_14_24
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24372..25754
DNA (1383bp) protein (461aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
ATP synthase subunit beta n=5 Tax=Serratia RepID=M3CML5_SERMA
L2_047_000G1_scaffold_14_25
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25775..26194
DNA (420bp) protein (140aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=7 Tax=Serratia RepID=L0MLF2_SERMA
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_14_26
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26485..27858
DNA (1374bp) protein (458aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157)
Fused N-acetylglucosamine-1-phosphateuridyltransferase/glucosamine-1-phosphate acetyltransferase n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A5F9_SERMA
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_14_27
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28008..29837
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
L-glutamine:D-fructose-6-phosphateaminotransferase n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A5B0_SERMA
L2_047_000G1_scaffold_14_28
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30173..31213
DNA (1041bp) protein (347aa)
Phosphate transporter subunit n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A559_SERMA
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
phosphate ABC transporter periplasmic substrate-binding protein PstS
L2_047_000G1_scaffold_14_29
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31305..32261
DNA (957bp) protein (319aa)
Phosphate ABC transporter permease PstC n=3 Tax=Serratia marcescens RepID=L7ZH12_SERMA
pstC; phosphate ABC transporter permease PstC
Phosphate ABC transporter permease PstC {ECO:0000313|EMBL:AGE15821.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_14_30
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32263..33153
DNA (891bp) protein (297aa)
phosphate transporter permease subunit PtsA n=1 Tax=Serratia marcescens RepID=UPI0002E5A0E5
pstA; phosphate transporter permease subunit PtsA
Phosphate transport system permease pstA {ECO:0000313|EMBL:EZQ58846.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Displaying items 1-30 of 244 in total

View Taxonomy