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L2_047_000G1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_17_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1023)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48194.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_17_2
unknown

Not on your lists

comp(1068..2288)
DNA (1221bp) protein (407aa)

This feature has no annotations

L2_047_000G1_scaffold_17_3
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(2311..3483)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J132_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43917.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L2_047_000G1_scaffold_17_4
unknown

Not on your lists

comp(3499..4800)
DNA (1302bp) protein (434aa)

This feature has no annotations

L2_047_000G1_scaffold_17_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(4818..5126)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13340.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
PadR family transcriptional regulator
L2_047_000G1_scaffold_17_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

5332..6192
DNA (861bp) protein (287aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; Stage II sporulation protein GA {ECO:0000256|PIRNR:PIRNR018571}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Sigma-E processing peptidase SpoIIGA n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUI8_9FIRM
putative peptidase
L2_047_000G1_scaffold_17_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6217..6936
DNA (720bp) protein (240aa)
RNA polymerase sigma factor n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9E3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sigE; RNA polymerase sigma-E factor precursor
L2_047_000G1_scaffold_17_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7073..7735
DNA (663bp) protein (221aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9E2_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Rex DNA-binding domain-containing protein
L2_047_000G1_scaffold_17_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7732..8811
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48188.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_000G1_scaffold_17_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8862..9086)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98148.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_047_000G1_scaffold_17_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9614..10924
DNA (1311bp) protein (437aa)
Electron transport complex protein RnfC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCE1_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
electron transport complex, RnfABCDGE type, C subunit
L2_047_000G1_scaffold_17_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10924..11853
DNA (930bp) protein (310aa)
Electron transport complex protein RnfD n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCE0_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
electron transport complex, RnfABCDGE type, D subunit
L2_047_000G1_scaffold_17_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11850..12383
DNA (534bp) protein (178aa)
Electron transport complex, rnfabcdge type, G subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCD9_9FIRM
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfG
L2_047_000G1_scaffold_17_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12400..13095
DNA (696bp) protein (232aa)
Electron transport complex protein RnfE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCD8_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
electron transport complex, RnfABCDGE type, E subunit
L2_047_000G1_scaffold_17_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13095..13712
DNA (618bp) protein (206aa)
Electron transport complex protein RnfA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCD7_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
electron transport complex, RnfABCDGE type, A subunit
L2_047_000G1_scaffold_17_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13733..14533
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48247.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
L2_047_000G1_scaffold_17_17
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14809..15210)
DNA (402bp) protein (134aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIM6_9FIRM
Fe-S iron-sulfur cluster assembly protein, NifU family {ECO:0000313|EMBL:EFB77385.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L2_047_000G1_scaffold_17_18
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15220..16410)
DNA (1191bp) protein (397aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Clostridium sp. CAG:448 RepID=R6TNI4_9CLOT
L2_047_000G1_scaffold_17_19
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16465..17397)
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase n=1 Tax=Clostridium sp. CAG:448 RepID=R6SGD6_9CLOT
L2_047_000G1_scaffold_17_20
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(17411..18748)
DNA (1338bp) protein (446aa)
OAH/OAS sulfhydrylase (EC:2.5.1.-)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EM41_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:CCX93770.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L2_047_000G1_scaffold_17_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19038..19685
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47755.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_17_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19645..19830
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35386.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_047_000G1_scaffold_17_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

19843..20106
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YF10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14167.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_047_000G1_scaffold_17_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20538..21296
DNA (759bp) protein (253aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBM8_9FIRM
L2_047_000G1_scaffold_17_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21377..22213
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47757.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
EDD domain protein, DegV family
L2_047_000G1_scaffold_17_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22367..22966
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47758.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_047_000G1_scaffold_17_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23339..24484
DNA (1146bp) protein (382aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3)
Oxaloacetate decarboxylase, beta subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN1_9FIRM
Oxaloacetate decarboxylase, beta subunit {ECO:0000313|EMBL:EGJ47759.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_17_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24502..24630
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47760.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_17_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24721..24990)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48144.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_000G1_scaffold_17_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25258..27033)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48145.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
fibronectin-binding protein
Displaying items 1-30 of 250 in total

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