ggKbase home page

L2_047_000G1_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 242 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_26_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(395..1927)
DNA (1533bp) protein (511aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K402_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98245.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_2
unknown

Not on your lists

comp(2146..2505)
DNA (360bp) protein (120aa)

This feature has no annotations

L2_047_000G1_scaffold_26_3
unknown

Not on your lists

2536..3339
DNA (804bp) protein (268aa)

This feature has no annotations

L2_047_000G1_scaffold_26_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3233..4648)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ08447.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_047_000G1_scaffold_26_5
unknown

Not on your lists

5176..5349
DNA (174bp) protein (58aa)

This feature has no annotations

L2_047_000G1_scaffold_26_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5773..5937
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Q9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98152.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6352..7002)
DNA (651bp) protein (217aa)
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CBK98242.1}; EC=2.7.6.2 {ECO:0000313|EMBL:CBK98242.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Thiamine pyrophosphokinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z9_9FIRM
L2_047_000G1_scaffold_26_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7607..8488)
DNA (882bp) protein (294aa)
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820, ECO:0000313|EMBL:CBK98241.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z8_9FIRM
L2_047_000G1_scaffold_26_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8499..10400)
DNA (1902bp) protein (634aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:CBK98240.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CBK98240.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z7_9FIRM
L2_047_000G1_scaffold_26_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10393..11142)
DNA (750bp) protein (250aa)
Serine/threonine protein phosphatase (EC:3.1.3.16)
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CBK98239.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CBK98239.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Serine/threonine protein phosphatase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z6_9FIRM
L2_047_000G1_scaffold_26_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11156..12196)
DNA (1041bp) protein (347aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z5_9FIRM
L2_047_000G1_scaffold_26_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12212..13540)
DNA (1329bp) protein (443aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ribosomal RNA small subunit methyltransferase RsmB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H5H8_9FIRM
L2_047_000G1_scaffold_26_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13537..14457)
DNA (921bp) protein (307aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Methionyl-tRNA formyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z4_9FIRM
L2_047_000G1_scaffold_26_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14457..14993)
DNA (537bp) protein (179aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Peptide deformylase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z3_9FIRM
L2_047_000G1_scaffold_26_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15018..17279)
DNA (2262bp) protein (754aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
primosomal protein N' (EC:3.6.1.-)
Primosomal protein N' n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z2_9FIRM
L2_047_000G1_scaffold_26_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17293..17865)
DNA (573bp) protein (191aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Guanylate kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z1_9FIRM
L2_047_000G1_scaffold_26_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17869..18132)
DNA (264bp) protein (88aa)
UPF0296 protein FP2_06040 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Z0_9FIRM
hypothetical protein
UPF0296 protein FP2_06040 {ECO:0000256|HAMAP-Rule:MF_01503}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18154..19032)
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y9_9FIRM
conserved hypothetical protein TIGR00255
Uncharacterized protein {ECO:0000313|EMBL:CBK98232.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19918..21321)
DNA (1404bp) protein (468aa)
Pyruvate/oxaloacetate carboxyltransferase (EC:4.1.1.3)
Pyruvate/oxaloacetate carboxyltransferase {ECO:0000313|EMBL:CBK98231.1}; EC=4.1.1.3 {ECO:0000313|EMBL:CBK98231.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Pyruvate/oxaloacetate carboxyltransferase n=2 Tax=root RepID=D4K3Y8_9FIRM
L2_047_000G1_scaffold_26_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21338..21721)
DNA (384bp) protein (128aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit (EC:4.1.1.41)
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:CBK98230.1}; EC=4.1.1.41 {ECO:0000313|EMBL:CBK98230.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y7_9FIRM
L2_047_000G1_scaffold_26_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21768..23087)
DNA (1320bp) protein (440aa)
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) (EC:4.1.1.41 6.4.1.3)
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:CBK98229.1}; EC=4.1.1.41 {ECO:0000313|EMBL:CBK98229.1};; EC=6.4.1.3 {ECO:0000313|EMBL:CBK98229.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y6_9FIRM
L2_047_000G1_scaffold_26_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23234..24070)
DNA (837bp) protein (279aa)
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:CBK98228.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y5_9FIRM
L2_047_000G1_scaffold_26_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24323..24727)
DNA (405bp) protein (135aa)
Sporulation protein YtfJ n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y4_9FIRM
sporulation protein YtfJ
Sporulation protein YtfJ {ECO:0000313|EMBL:CBK98227.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24898..25173)
DNA (276bp) protein (92aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y3_9FIRM
addiction module toxin, RelE/StbE family
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:CBK98226.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25170..25439)
DNA (270bp) protein (90aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y2_9FIRM
addiction module antitoxin, RelB/DinJ family
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:CBK98225.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25505..26227)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98224.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26224..26757)
DNA (534bp) protein (178aa)
Segregation and condensation protein B n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3Y0_9FIRM
segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417, ECO:0000313|EMBL:CBK98223.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26754..27485)
DNA (732bp) protein (244aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3X9_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK98222.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27485..28159)
DNA (675bp) protein (225aa)
Zn-dependent proteases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3X8_9FIRM
Zn-dependent proteases
Zn-dependent proteases {ECO:0000313|EMBL:CBK98221.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_000G1_scaffold_26_30
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28354..28542
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=3 Tax=Faecalibacterium RepID=D4K3X7_9FIRM
LSU ribosomal protein L28P
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Displaying items 1-30 of 242 in total

View Taxonomy