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L2_047_000G1_scaffold_28

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Displaying items 1-30 of 192 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_28_1
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(362..1306)
DNA (945bp) protein (315aa)
transcriptional regulator n=1 Tax=Serratia marcescens RepID=UPI00030C893E
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EZQ61458.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_2
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1425..2417
DNA (993bp) protein (331aa)
Aldo/keto reductase family protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6A0_SERMA
aldo/keto reductase
Uncharacterized protein {ECO:0000313|EMBL:EZQ61457.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_3
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2469..3509)
DNA (1041bp) protein (347aa)
Ribosomal RNA small subunit methyltransferase C {ECO:0000256|HAMAP-Rule:MF_01862, ECO:0000256|SAAS:SAAS00048249}; EC=2.1.1.172 {ECO:0000256|HAMAP-Rule:MF_01862, ECO:0000256|SAAS:SAAS00048248};; 16S rRNA m2G1207 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01862}; rRNA (guanine-N(2)-)-methyltransferase RsmC {ECO:0000256|HAMAP-Rule:MF_01862}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
16S rRNA m2G1207 methylase n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6F6_SERMA
rsmC; 16S ribosomal RNA m2G1207 methyltransferase
L2_047_000G1_scaffold_28_4
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3656..4093
DNA (438bp) protein (146aa)
DNA polymerase III, psi subunit n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6Y3_SERMA
DNA polymerase III subunit psi
DNA polymerase III subunit psi {ECO:0000256|PIRNR:PIRNR029225}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_5
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4038..4481
DNA (444bp) protein (148aa)
rimI; ribosomal-protein-alanine N-acetyltransferase (EC:2.3.1.128)
alanine acetyltransferase n=1 Tax=Serratia marcescens RepID=UPI00037698DB
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EZQ61454.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_6
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4633..6222
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=3 Tax=Serratia marcescens RepID=L7ZH07_SERMA
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_28_7
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6739..7353
DNA (615bp) protein (205aa)
Periplasmic protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6A5_SERMA
periplasmic protein
Periplasmic protein {ECO:0000313|EMBL:EZQ61452.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_8
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7515..7676
DNA (162bp) protein (54aa)
UPF0391 membrane protein SMWW4_v1c06470 n=5 Tax=Serratia RepID=L7ZGY5_SERMA
hypothetical protein
UPF0391 membrane protein L581_2329 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1332071 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fonticola AU-AP2C.;"
L2_047_000G1_scaffold_28_9
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7745..7930
DNA (186bp) protein (62aa)
Uncharacterized protein n=3 Tax=Serratia marcescens RepID=L7ZFI8_SERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGE16455.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_28_10
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8013..9059
DNA (1047bp) protein (349aa)
Patatin-like phospholipase n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6U4_SERMA
patatin
Phosphoesterase {ECO:0000313|EMBL:KFF80581.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_28_11
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9056..9838
DNA (783bp) protein (261aa)
Putative TatD-related DNAase n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6R2_SERMA
TatD-related deoxyribonuclease
DNase {ECO:0000313|EMBL:EZQ61448.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_12
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10023..11300
DNA (1278bp) protein (426aa)
Nucleoside transporter n=3 Tax=Serratia marcescens RepID=L7ZAT1_SERMA
nucleoside transporter
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_28_13
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11671..12450
DNA (780bp) protein (260aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00592};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00592}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
deoxyribose-phosphate aldolase n=1 Tax=Serratia marcescens RepID=UPI0002EF7AFA
deoC; 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked
L2_047_000G1_scaffold_28_14
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12517..13842
DNA (1326bp) protein (442aa)
Thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031985};; TdRPase {ECO:0000256|HAMAP-Rule:MF_01628}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
deoA; thymidine phosphorylase (EC:2.4.2.4)
thymidine phosphorylase n=1 Tax=Serratia marcescens RepID=UPI0002D6106B
L2_047_000G1_scaffold_28_15
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14036..15259
DNA (1224bp) protein (408aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Serratia marcescens VGH107 RepID=M3CQ08_SERMA
L2_047_000G1_scaffold_28_16
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15426..16157
DNA (732bp) protein (244aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
Purine nucleoside phosphorylase DeoD-type n=4 Tax=Serratia marcescens RepID=L7ZH21_SERMA
deoD; purine-nucleoside phosphorylase
L2_047_000G1_scaffold_28_17
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16295..17638
DNA (1344bp) protein (448aa)
DNA-binding transcriptional regulator n=1 Tax=Serratia marcescens VGH107 RepID=M3AK34_SERMA
Transcriptional regulator {ECO:0000313|EMBL:KFF87295.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
hypothetical protein
L2_047_000G1_scaffold_28_18
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17640..18323)
DNA (684bp) protein (228aa)
Membrane protein n=3 Tax=Serratia marcescens RepID=L7ZAT9_SERMA
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AGE16463.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_28_19
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18434..19411
DNA (978bp) protein (326aa)
serB; phosphoserine phosphatase (EC:3.1.3.3)
phosphoserine phosphatase n=1 Tax=Serratia marcescens RepID=UPI0003801468
Phosphoserine phosphatase {ECO:0000313|EMBL:EZQ61441.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_20
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19431..20816
DNA (1386bp) protein (462aa)
DNA repair protein radA n=1 Tax=Serratia marcescens VGH107 RepID=M3CQ04_SERMA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
radA; DNA repair protein
L2_047_000G1_scaffold_28_21
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20875..22149
DNA (1275bp) protein (425aa)
Bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase n=1 Tax=Serratia marcescens WW4 RepID=L7ZIS6_SERMA
Trifunctional NAD biosynthesis/regulator protein NadR {ECO:0000313|EMBL:EZQ61439.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
nadR; bifunctional DNA-binding transcriptional repressor/NMN adenylyltransferase
L2_047_000G1_scaffold_28_22
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22283..23716
DNA (1434bp) protein (478aa)
Putative membrane protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6R9_SERMA
Uncharacterized protein {ECO:0000313|EMBL:EZQ61438.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
hypothetical protein
L2_047_000G1_scaffold_28_23
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23748..24749)
DNA (1002bp) protein (334aa)
NADPH:quinone reductase n=1 Tax=Serratia marcescens RepID=UPI00030A9FB3
zinc-binding alcohol dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:EZQ61437.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_24
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24847..25758
DNA (912bp) protein (304aa)
LysR-family transcriptional regulator n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A6H2_SERMA
LysR-family transcriptional regulator
LysR-family transcriptional regulator {ECO:0000313|EMBL:BAO36903.1}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
L2_047_000G1_scaffold_28_25
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25866..26771
DNA (906bp) protein (302aa)
AraC family transcriptional regulator n=1 Tax=Serratia marcescens RepID=UPI0002EEC700
Uncharacterized protein {ECO:0000313|EMBL:EZQ61435.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
hypothetical protein
L2_047_000G1_scaffold_28_26
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26801..28468)
DNA (1668bp) protein (556aa)
ABC transporter, ATP-binding protein n=2 Tax=Serratia marcescens RepID=V6A6Z1_SERMA
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:BAO36907.1}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
ABC transporter, ATP-binding protein
L2_047_000G1_scaffold_28_27
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28611..29108)
DNA (498bp) protein (166aa)
cell envelope biogenesis protein OmpA n=1 Tax=Serratia marcescens RepID=UPI0002E81E3F
OmpA/MotB domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EZQ61433.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_28
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29147..30394)
DNA (1248bp) protein (416aa)
Putative inner membrane diguanylate cyclase n=1 Tax=Serratia marcescens WW4 RepID=L7ZH32_SERMA
Uncharacterized protein {ECO:0000313|EMBL:EZQ61432.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
diguanylate cyclase
L2_047_000G1_scaffold_28_29
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30391..30996)
DNA (606bp) protein (202aa)
156G surface protein n=1 Tax=Serratia marcescens RepID=UPI000365A0F3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZQ61431.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_28_30
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31634..33562
DNA (1929bp) protein (643aa)
lytic murein transglycosylase n=1 Tax=Serratia marcescens RepID=UPI0002F71263
lytic murein transglycosylase
Lytic murein transglycosylase, soluble {ECO:0000313|EMBL:EZQ61430.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Displaying items 1-30 of 192 in total

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