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L2_047_000G1_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 172 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_46_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..95)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=R0B5B0_9CLOT
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDN78858.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator, PadR family
L2_047_000G1_scaffold_46_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(228..2609)
DNA (2382bp) protein (794aa)
Efflux ABC transporter, permease protein n=2 Tax=root RepID=A7AZJ8_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78859.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ABC-type transport system, involved in lipoprotein release, permease component
L2_047_000G1_scaffold_46_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2687..5071)
DNA (2385bp) protein (795aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93235.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
permease
L2_047_000G1_scaffold_46_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5086..5751)
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=A7AZK0_RUMGN
ABC transporter {ECO:0000313|EMBL:EGA93234.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_047_000G1_scaffold_46_5
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6045..6461)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5Z5H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51652.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L2_047_000G1_scaffold_46_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6600..7388)
DNA (789bp) protein (263aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK1_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78862.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
putative permease
L2_047_000G1_scaffold_46_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7373..9256)
DNA (1884bp) protein (628aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK1_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78862.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
permease
L2_047_000G1_scaffold_46_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9366..11786)
DNA (2421bp) protein (807aa)
Efflux ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK2_RUMGN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDN78863.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_047_000G1_scaffold_46_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11888..12148)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93232.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L2_047_000G1_scaffold_46_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12279..13310)
DNA (1032bp) protein (344aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZK4_RUMGN
two-component sensor histidine kinase
L2_047_000G1_scaffold_46_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13307..14029)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPX0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93230.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_047_000G1_scaffold_46_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14222..14851)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93229.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14844..17318)
DNA (2475bp) protein (825aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93228.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17315..19432)
DNA (2118bp) protein (706aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93227.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19543..21567)
DNA (2025bp) protein (675aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
DNA ligase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW6_CLOSY
NAD-dependent DNA ligase
L2_047_000G1_scaffold_46_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21567..21890)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P890_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA93225.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21887..22144)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93224.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22211..24397)
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P892_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12138.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_047_000G1_scaffold_46_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24399..24941)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93222.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24967..25887)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93221.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25959..26207)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPW0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93220.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26223..28016)
DNA (1794bp) protein (598aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPV9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93219.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28059..29216)
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPV8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93218.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29286..31559)
DNA (2274bp) protein (758aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
RecD/TraA family helicase (EC:3.1.11.5)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPV7_CLOSY
L2_047_000G1_scaffold_46_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31575..32642)
DNA (1068bp) protein (356aa)
YqaJ viral recombinase family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P899_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA93216.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phage-type endonuclease
L2_047_000G1_scaffold_46_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33558..33758
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA93215.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_047_000G1_scaffold_46_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33811..35043
DNA (1233bp) protein (411aa)
Site-specific recombinase, phage integrase family n=2 Tax=Clostridiales RepID=B0P8A3_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS12149.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
integrase family protein
L2_047_000G1_scaffold_46_28
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(35173..35649)
DNA (477bp) protein (159aa)
Putative methionine--tRNA ligase, beta subunit n=1 Tax=Clostridium sp. M62/1 RepID=D4C8D5_9CLOT
Putative methionine--tRNA ligase, beta subunit {ECO:0000313|EMBL:EFE13772.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
EMAP domain
L2_047_000G1_scaffold_46_29
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35621..36940)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036198C1
Uncharacterized protein {ECO:0000313|EMBL:EMS72265.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L2_047_000G1_scaffold_46_30
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36959..37849)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JKW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30931.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
binding-protein-dependent transport system inner membrane protein
Displaying items 1-30 of 172 in total

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