ggKbase home page

L2_047_000G1_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_54_1
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..136
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Oryza sativa subsp. indica RepID=B8ACI1_ORYSI
outer membrane autotransporter
Uncharacterized protein {ECO:0000313|EMBL:EZQ55979.1}; Flags: Fragment;; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_2
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

593..1444
DNA (852bp) protein (284aa)
histidine kinase n=1 Tax=Serratia marcescens RepID=UPI0003030707
BetR domain-containing protein
Response regulator transcription factor EepR {ECO:0000313|EMBL:AFZ93918.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_54_3
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1434..3218)
DNA (1785bp) protein (595aa)
Integral membrane sensor hybrid histidine kinase n=2 Tax=Serratia marcescens RepID=L7ZUQ2_SERMA
integral membrane sensor hybrid histidine kinase
Uncharacterized protein {ECO:0000313|EMBL:EZQ60993.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_4
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3215..3709)
DNA (495bp) protein (165aa)
Molybdopterin binding oxidoreductase n=3 Tax=Serratia marcescens RepID=L7ZRZ0_SERMA
oxidoreductase molybdopterin binding protein
Uncharacterized protein {ECO:0000313|EMBL:EZQ60992.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_5
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3850..5217)
DNA (1368bp) protein (456aa)
GntR-family transcriptional regulator n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A4S1_SERMA
Uncharacterized protein {ECO:0000313|EMBL:EZQ60991.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
GntR family transcriptional regulator
L2_047_000G1_scaffold_54_6
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5358..5990
DNA (633bp) protein (211aa)
LysE-type translocator n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A4Y2_SERMA
Uncharacterized protein {ECO:0000313|EMBL:EZQ60990.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Lysine exporter protein (LYSE/YGGA)
L2_047_000G1_scaffold_54_7
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6021..6872
DNA (852bp) protein (284aa)
phenazine biosynthesis protein PhzF n=1 Tax=Serratia marcescens RepID=UPI000303E731
Uncharacterized protein {ECO:0000313|EMBL:EZQ60989.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
phenazine biosynthesis protein
L2_047_000G1_scaffold_54_8
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6940..7458
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Serratia marcescens RepID=UPI00031389A3
Uncharacterized protein {ECO:0000313|EMBL:EZQ60988.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
DinB family protein
L2_047_000G1_scaffold_54_9
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7536..8888)
DNA (1353bp) protein (451aa)
glutathione reductase (EC:1.8.1.7)
Glutathione oxidoreductase n=2 Tax=Serratia marcescens RepID=L7ZRY5_SERMA
Glutathione oxidoreductase {ECO:0000313|EMBL:AGE20450.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_54_10
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9019..9861)
DNA (843bp) protein (281aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Ribosomal RNA large subunit methyltransferase J n=4 Tax=Serratia marcescens RepID=L7ZTI2_SERMA
putative DNA (exogenous) processing protein
L2_047_000G1_scaffold_54_11
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9996..10400
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A4X7_SERMA
ASCH domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KFF79284.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_54_12
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10417..10878
DNA (462bp) protein (154aa)
diadenosine tetraphosphatehydrolase n=1 Tax=Serratia marcescens RepID=UPI0002E7F914
Diadenosine tetraphosphate hydrolase {ECO:0000313|EMBL:KFF79283.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
histidine triad (HIT) protein
L2_047_000G1_scaffold_54_13
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10997..13039
DNA (2043bp) protein (681aa)
Oligopeptidase A n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A418_SERMA
Oligopeptidase A {ECO:0000313|EMBL:EZQ60983.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
oligopeptidase A
L2_047_000G1_scaffold_54_14
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13048..13794
DNA (747bp) protein (249aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Serratia marcescens WW4 RepID=L7ZRX9_SERMA
hypothetical protein
L2_047_000G1_scaffold_54_15
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13823..14422)
DNA (600bp) protein (200aa)
Putative phosphosugar-binding protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A4R4_SERMA
sugar isomerase (SIS)
Uncharacterized protein {ECO:0000313|EMBL:EZQ60981.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_16
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14422..16059)
DNA (1638bp) protein (546aa)
FGGY-family pentulose kinase n=1 Tax=Serratia marcescens VGH107 RepID=M3C4I1_SERMA
FGGY family pentulose kinase
Ribulokinase {ECO:0000313|EMBL:KFF87530.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
L2_047_000G1_scaffold_54_17
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16070..17023)
DNA (954bp) protein (318aa)
ABC transporter permease n=1 Tax=Serratia marcescens RepID=UPI0002D7F83E
monosaccharide-transporting ATPase
Uncharacterized protein {ECO:0000313|EMBL:EZQ60979.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_18
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17025..18014)
DNA (990bp) protein (330aa)
ABC transporter n=2 Tax=Serratia marcescens RepID=L7ZUN4_SERMA
ABC transporter
ABC transporter {ECO:0000313|EMBL:AGE20441.1}; TaxID=435998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens WW4.;"
L2_047_000G1_scaffold_54_19
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18007..19506)
DNA (1500bp) protein (500aa)
ABC transporter-like protein n=1 Tax=Serratia marcescens WW4 RepID=L7ZRX4_SERMA
ABC transporter ATP binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EZQ60977.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_20
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19612..20598)
DNA (987bp) protein (329aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Serratia marcescens RepID=M4SIP4_SERMA
LacI family transcriptional regulator {ECO:0000313|EMBL:KGY48527.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
ABC transporter, substrate-binding protein
L2_047_000G1_scaffold_54_21
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20928..22271)
DNA (1344bp) protein (448aa)
glutamate dehydrogenase (EC:1.4.1.4)
glutamate dehydrogenase n=1 Tax=Serratia marcescens RepID=UPI00031EBB2F
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
L2_047_000G1_scaffold_54_22
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22472..22909)
DNA (438bp) protein (146aa)
Universal stress protein n=4 Tax=Serratia marcescens RepID=L7ZTM1_SERMA
universal stress global response regulator UspA
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1334564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens SM39.;"
L2_047_000G1_scaffold_54_23
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23177..24085)
DNA (909bp) protein (303aa)
Putative DNA-binding transcriptional regulator n=1 Tax=Serratia marcescens WW4 RepID=L7ZUM9_SERMA
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EZQ60973.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_24
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24190..24963)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase n=2 Tax=Serratia marcescens RepID=L7ZRW9_SERMA
short-chain dehydrogenase/reductase SDR
Uncharacterized protein {ECO:0000313|EMBL:EZQ60972.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_25
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25398..25733
DNA (336bp) protein (112aa)
Universal stress protein B n=3 Tax=Serratia marcescens RepID=L7ZTG7_SERMA
uspB; universal stress (ethanol tolerance) protein B
Universal stress protein B {ECO:0000256|HAMAP-Rule:MF_01088, ECO:0000256|SAAS:SAAS00025222}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_26
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25807..27309)
DNA (1503bp) protein (501aa)
Phosphate transporter, low-affinity n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A4W2_SERMA
phosphate transporter
Inorganic phosphate transporter 1 {ECO:0000313|EMBL:EZQ60970.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_27
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27610..28809
DNA (1200bp) protein (400aa)
Putative exported protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A467_SERMA
Oxidoreductase with FAD/NAD(P)-binding domain-containing protein {ECO:0000313|EMBL:EZQ60969.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
hypothetical protein
L2_047_000G1_scaffold_54_28
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28827..29081)
DNA (255bp) protein (85aa)
Putative membrane protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A406_SERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF79267.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
L2_047_000G1_scaffold_54_29
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29090..29500)
DNA (411bp) protein (137aa)
Dioxygenase superfamily protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A4J4_SERMA
glyoxalase/bleomycin resistance
Uncharacterized protein {ECO:0000313|EMBL:EZQ60965.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
L2_047_000G1_scaffold_54_30
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29594..31774)
DNA (2181bp) protein (727aa)
Putative SsrAB-activated protein n=1 Tax=Serratia marcescens subsp. marcescens Db11 RepID=V6A4I8_SERMA
putative virulence factor
Uncharacterized protein {ECO:0000313|EMBL:EZQ60960.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
Displaying items 1-30 of 159 in total

View Taxonomy