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L2_047_000G1_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_70_1
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..550
DNA (549bp) protein (183aa)
Segregation and condensation protein A n=1 Tax=Clostridium sp. CAG:343 RepID=R6N6H1_9CLOT
Segregation and condensation protein A {ECO:0000256|HAMAP-Rule:MF_01805, ECO:0000256|SAAS:SAAS00093938}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L2_047_000G1_scaffold_70_2
unknown

Not on your lists

731..835
DNA (105bp) protein (35aa)

This feature has no annotations

L2_047_000G1_scaffold_70_3
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

908..4645
DNA (3738bp) protein (1246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GCV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25219.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
fibronectin type III domain protein
L2_047_000G1_scaffold_70_4
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4820..5446
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FJC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE14980.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
L2_047_000G1_scaffold_70_5
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5400..5948
DNA (549bp) protein (183aa)
Sporulation protein YtfJ n=1 Tax=Clostridium sp. CAG:343 RepID=R6NN03_9CLOT
Sporulation protein YtfJ {ECO:0000313|EMBL:CDC07596.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
sporulation protein YtfJ
L2_047_000G1_scaffold_70_6
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6363..6674
DNA (312bp) protein (104aa)
Anti-sigma factor antagonist n=1 Tax=Clostridium sp. CAG:575 RepID=R6H285_9CLOT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
anti-sigma F factor antagonist
L2_047_000G1_scaffold_70_7
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6868..7350
DNA (483bp) protein (161aa)
Anti-sigma regulatory factor serine/threonine protein kinase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NIK9_9CLOT
Anti-sigma regulatory factor serine/threonine protein kinase {ECO:0000313|EMBL:CDC06066.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
anti-sigma factor F
L2_047_000G1_scaffold_70_8
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7611..8126
DNA (516bp) protein (172aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:343 RepID=R6N254_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
RNA polymerase sigma-subunit RpoX/SigF
L2_047_000G1_scaffold_70_9
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8163..9230
DNA (1068bp) protein (356aa)
Stage II sporulation protein D n=1 Tax=Clostridium sp. CAG:343 RepID=R6NCQ3_9CLOT
Stage II sporulation protein D {ECO:0000313|EMBL:CDC06069.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
SpoIID/LytB domain-containing protein
L2_047_000G1_scaffold_70_10
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9247..10149
DNA (903bp) protein (301aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N4Z4_9CLOT
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:CDC06070.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
metalloendopeptidase-like membrane protein
L2_047_000G1_scaffold_70_11
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10372..11463
DNA (1092bp) protein (364aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium sp. CAG:470 RepID=R7FIG4_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
engD; GTP-dependent nucleic acid-binding protein EngD
L2_047_000G1_scaffold_70_12
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11716..12126
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GBQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24421.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
adhesin-like protein
L2_047_000G1_scaffold_70_13
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12163..12840)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GEP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE24422.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
L2_047_000G1_scaffold_70_14
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12974..14317
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GIB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25717.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
dolichyl-phosphate-mannose--protein O-mannosyl transferase
L2_047_000G1_scaffold_70_15
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14452..15306
DNA (855bp) protein (285aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium sp. CAG:575 RepID=R6H438_9CLOT
L2_047_000G1_scaffold_70_16
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15365..15475
DNA (111bp) protein (37aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FGZ5_9CLOT
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L2_047_000G1_scaffold_70_17
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15642..16766
DNA (1125bp) protein (375aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
tgt; Queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Clostridium sp. CAG:389 RepID=R7LT41_9CLOT
L2_047_000G1_scaffold_70_18
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16793..18349
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NF69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06999.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
anti-sigma I factor
L2_047_000G1_scaffold_70_19
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18519..19856
DNA (1338bp) protein (446aa)
accC1; Biotin carboxylase 1 (EC:6.3.4.14)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Clostridium sp. CAG:356 RepID=R7A4G4_9CLOT
Acetyl-CoA carboxylase biotin carboxylase subunit {ECO:0000313|EMBL:CDD37632.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
L2_047_000G1_scaffold_70_20
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19873..20730
DNA (858bp) protein (286aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z0L2_9CLOT
L2_047_000G1_scaffold_70_21
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20757..21557
DNA (801bp) protein (267aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z0L2_9CLOT
acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
L2_047_000G1_scaffold_70_22
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21673..22443
DNA (771bp) protein (257aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Clostridium sp. CAG:356 RepID=R6YM91_9CLOT
short-chain dehydrogenase/reductase SDR
L2_047_000G1_scaffold_70_23
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22668..24248
DNA (1581bp) protein (527aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:343 RepID=R6NGV7_9CLOT
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CDC07604.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
dipeptide ABC transporter periplasmic protein
L2_047_000G1_scaffold_70_24
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24338..25387
DNA (1050bp) protein (350aa)
Protein RecA n=1 Tax=Clostridium sp. CAG:343 RepID=R6N6H6_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
recA protein
L2_047_000G1_scaffold_70_25
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25797..26069
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6YSE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD36810.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
L2_047_000G1_scaffold_70_26
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26059..26511
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6YSE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD36810.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
L2_047_000G1_scaffold_70_27
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26668..27117
DNA (450bp) protein (150aa)
Ribosome maturation factor RimP n=1 Tax=Clostridium sp. CAG:343 RepID=R6N702_9CLOT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
ribosome maturation protein RimP
L2_047_000G1_scaffold_70_28
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27140..28243
DNA (1104bp) protein (368aa)
NusA antitermination factor n=1 Tax=Clostridium sp. CAG:440 RepID=R7GFP2_9CLOT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
NusA antitermination factor
L2_047_000G1_scaffold_70_29
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28282..28542
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FIM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE14333.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
hypothetical protein
L2_047_000G1_scaffold_70_30
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28532..28852
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6PAF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06877.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
Displaying items 1-30 of 169 in total

View Taxonomy