ggKbase home page

L2_047_000G1_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_79_1
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(302..895)
DNA (594bp) protein (198aa)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Blautia sp. CAG:52 RepID=R6GJL6_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDB21411.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase
L2_047_000G1_scaffold_79_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(1003..2619)
DNA (1617bp) protein (539aa)
Na/Pi-cotransporter family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5REP1_9FIRM
Na/Pi-cotransporter family protein {ECO:0000313|EMBL:CCZ33161.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Na/Pi-cotransporter II-related protein
L2_047_000G1_scaffold_79_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(2616..3551)
DNA (936bp) protein (312aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJP0_9FIRM
bifunctional riboflavin kinase/FMN adenylyltransferase
L2_047_000G1_scaffold_79_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(3555..4460)
DNA (906bp) protein (302aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
tRNA pseudouridine synthase B n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R361_9FIRM
tRNA pseudouridine synthase B
L2_047_000G1_scaffold_79_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(4450..5421)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QWJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33165.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Exopolyphosphatase-related proteins
L2_047_000G1_scaffold_79_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(5411..5794)
DNA (384bp) protein (128aa)
Ribosome-binding factor A n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5REP5_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ribosome-binding factor A
L2_047_000G1_scaffold_79_7
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5876..8638)
DNA (2763bp) protein (921aa)
Translation initiation factor IF-2 n=1 Tax=Roseburia sp. CAG:471 RepID=R7EDB0_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
bacterial translation initiation factor 2 (bIF-2)
L2_047_000G1_scaffold_79_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(8661..8969)
DNA (309bp) protein (103aa)
Ribosomal protein HS6-type (S12/L30/L7a) n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXK0_9FIRM
Ribosomal protein HS6-type (S12/L30/L7a) {ECO:0000313|EMBL:CCZ33168.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Ribosomal protein HS6-type (S12/L30/L7a)
L2_047_000G1_scaffold_79_9
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(8956..9234)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QWJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33170.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Predicted nucleic-acid-binding protein implicated in transcription termination
L2_047_000G1_scaffold_79_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(9254..10411)
DNA (1158bp) protein (386aa)
Transcription termination factor NusA n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5REP9_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transcription termination factor NusA
L2_047_000G1_scaffold_79_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(10429..10896)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJQ0_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ribosome maturation protein RimP
L2_047_000G1_scaffold_79_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(11046..11630)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33173.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_000G1_scaffold_79_13
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists


comp(11631..13868)
DNA (2238bp) protein (746aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R370_9FIRM
L2_047_000G1_scaffold_79_14
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(13893..15815)
DNA (1923bp) protein (641aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QWK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33175.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_000G1_scaffold_79_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(15828..16649)
DNA (822bp) protein (274aa)
Cof-like hydrolase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5REQ2_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ33176.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
cof family hydrolase
L2_047_000G1_scaffold_79_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(16794..17471)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33177.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_000G1_scaffold_79_17
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(17419..17661)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33178.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_000G1_scaffold_79_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(17889..18218)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R376_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33179.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_000G1_scaffold_79_19
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(18247..18633)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QWK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33180.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_000G1_scaffold_79_20
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(19187..20398)
DNA (1212bp) protein (404aa)
cystathionine beta-lyase (EC:4.4.1.8)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5REQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33181.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_000G1_scaffold_79_21
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(20413..20697)
DNA (285bp) protein (95aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJQ9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ33182.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
MATE efflux family protein
L2_047_000G1_scaffold_79_22
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(20892..21089)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33183.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
heavy metal transport/detoxification protein
L2_047_000G1_scaffold_79_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(21103..21414)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QWK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33185.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_000G1_scaffold_79_24
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(21449..23689)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RER0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33186.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
copper-translocating P-type ATPase
L2_047_000G1_scaffold_79_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(23763..24593)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33187.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_000G1_scaffold_79_26
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(24595..25242)
DNA (648bp) protein (216aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXL6_9FIRM
L2_047_000G1_scaffold_79_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(25326..28544)
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R386_9FIRM
L2_047_000G1_scaffold_79_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

28769..30157
DNA (1389bp) protein (463aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QWL0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ33190.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
MATE efflux family protein
L2_047_000G1_scaffold_79_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(30220..31539)
DNA (1320bp) protein (440aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RER4_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CCZ33191.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_000G1_scaffold_79_30
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(31600..32385)
DNA (786bp) protein (262aa)
Putative AP endonuclease family 2 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJR7_9FIRM
Putative AP endonuclease family 2 {ECO:0000313|EMBL:CCZ33192.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
xylose isomerase domain-containing protein TIM barrel
Displaying items 1-30 of 138 in total

View Taxonomy