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L2_047_000G1_scaffold_80

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000G1_scaffold_80_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35872.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_000G1_scaffold_80_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

431..1039
DNA (609bp) protein (203aa)
Recombinase family protein n=5 Tax=Clostridium difficile RepID=T3FV09_CLODI
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDM99558.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative site-specific recombinase
L2_047_000G1_scaffold_80_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1024..1707)
DNA (684bp) protein (228aa)
Type II restriction endonuclease family protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZ86_9FIRM
Type II restriction endonuclease family protein {ECO:0000313|EMBL:CCY30027.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
restriction endonuclease family protein
L2_047_000G1_scaffold_80_4
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1726..2862)
DNA (1137bp) protein (379aa)
Site-specific recombinase resolvase family putative n=1 Tax=Clostridium sp. CAG:798 RepID=R6YAY2_9CLOT
Site-specific recombinase resolvase family putative {ECO:0000313|EMBL:CDD15627.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
L2_047_000G1_scaffold_80_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2990..3400
DNA (411bp) protein (137aa)
Recombinase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPQ3_9FIRM
Recombinase {ECO:0000313|EMBL:EHM52471.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative site-specific recombinase
L2_047_000G1_scaffold_80_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3491..3895
DNA (405bp) protein (135aa)
Resolvase, N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWM1_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDM99558.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative site-specific recombinase
L2_047_000G1_scaffold_80_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3892..4020
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27644.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative site-specific recombinase
L2_047_000G1_scaffold_80_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

4346..5296
DNA (951bp) protein (317aa)
Putative permease n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MAF3_9FIRM
Putative permease {ECO:0000313|EMBL:CDB95520.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
permease
L2_047_000G1_scaffold_80_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5387..6628)
DNA (1242bp) protein (414aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
glyA; Serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV72_9FIRM
L2_047_000G1_scaffold_80_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6819..7463
DNA (645bp) protein (215aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6R7_9FIRM
L2_047_000G1_scaffold_80_11
Enterococcus moraviensis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7482..8093
DNA (612bp) protein (204aa)
cat; chloramphenicol acetyltransferase (EC:2.3.1.28)
Uncharacterized protein n=1 Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2QYZ2_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOI00616.1}; TaxID=1158609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus moraviensis ATCC BAA-383.;"
L2_047_000G1_scaffold_80_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8204..10078)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99849.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_047_000G1_scaffold_80_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10417..11790)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLF2_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM54817.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
MatE efflux family protein
L2_047_000G1_scaffold_80_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11814..12599)
DNA (786bp) protein (262aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Type III pantothenate kinase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0K5_9FIRM
putative Baf family transcriptional acitvator
L2_047_000G1_scaffold_80_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12639..13112)
DNA (474bp) protein (158aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Phosphodiesterase family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLF0_9FIRM
hypothetical protein
L2_047_000G1_scaffold_80_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13185..13454
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98139.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_047_000G1_scaffold_80_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13499..14011
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YLE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54813.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_047_000G1_scaffold_80_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14004..14444
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98141.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_047_000G1_scaffold_80_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14423..15214)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98142.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_047_000G1_scaffold_80_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15316..16464)
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EDM98143.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EDM98143.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0L1_9FIRM
L2_047_000G1_scaffold_80_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16461..17564)
DNA (1104bp) protein (368aa)
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EDM98144.1}; EC=2.7.8.- {ECO:0000313|EMBL:EDM98144.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Glycosyltransferase, group 4 family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0L2_9FIRM
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase
L2_047_000G1_scaffold_80_22
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17610..18623)
DNA (1014bp) protein (338aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UK58_9FIRM
L2_047_000G1_scaffold_80_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18759..20249
DNA (1491bp) protein (497aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0L5_9FIRM
L2_047_000G1_scaffold_80_24
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20546..22150)
DNA (1605bp) protein (535aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P112_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM98033.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
glycosyl transferase family 1
L2_047_000G1_scaffold_80_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22445..23815
DNA (1371bp) protein (457aa)
Germination protein YpeB n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6Q4_9FIRM
Germination protein YpeB {ECO:0000313|EMBL:EHO35790.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
germination protein YpeB
L2_047_000G1_scaffold_80_26
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24097..24330)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE81748.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L2_047_000G1_scaffold_80_27
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24391..25308)
DNA (918bp) protein (306aa)
Hydrolase carbon-nitrogen family n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZG5_9FIRM
Hydrolase carbon-nitrogen family {ECO:0000313|EMBL:CDE81750.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
amiF; formamidase
L2_047_000G1_scaffold_80_28
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25387..26640)
DNA (1254bp) protein (418aa)
Major facilitator superfamily transporter n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KWX8_OSCVS
Major facilitator superfamily transporter {ECO:0000313|EMBL:CEO90318.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
major facilitator superfamily transporter
L2_047_000G1_scaffold_80_29
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27170..28660
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CWS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71701.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_047_000G1_scaffold_80_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28669..29118)
DNA (450bp) protein (150aa)
ydhI; uncharacterized protein ydhI (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLD8_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHM54803.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Displaying items 1-30 of 152 in total

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